The proximity of the Cys residues present in the mitochondrial rat carnitine/acylcarnitine carrier (CAC) primary structure was studied by using site-directed mutagenesis in combination with chemical modification. CAC mutants, in which one or more Cys residues had been replaced with Ser, were overexpressed in Escherichia coli and reconstituted into liposomes. The effect of SH oxidizing, cross-linking, and coordinating reagents was evaluated on the carnitine/carnitine exchange catalyzed by the recombinant reconstituted CAC proteins. The mitochondrial carnitine/acylcarnitine carrier (CAC) 1 plays a central role in the translocation of fatty acids as acylcarnitines into the mitochondrial matrix, where the acyl groups are used for fatty acid oxidation (1, 2). After some pioneer studies in intact mitochondria, the CAC was purified (3) and characterized in reconstituted liposomes (see Ref. 4 and references therein). In particular, the CAC was found to be very sensitive to cysteine-specific reagents such as N-ethylmaleimide, mercurials, and diamide (4). Later, the amino acid sequence of the carrier was determined by cDNA sequencing (5), showing that it belongs to the mitochondrial carrier protein family (reviewed in Ref.2). On the basis of the hydrophobic profile of the CAC and its sequence similarity with the other mitochondrial carriers, a model for its arrangement in the inner mitochondrial membrane has been proposed (5). According to this model, the CAC polypeptide chain has six transmembrane ␣-helices (I-VI) traversing the membrane, connected by hydrophilic loops, and both the N and C termini protruding toward the cytosol. This asymmetric orientation of the membrane-embedded CAC is also supported by functional studies indicating different substrate-binding sites on the inner and outer faces in both intact mitochondria (6) and reconstituted liposomes (7). The CAC is encoded in man by the gene SLC25A20 (2) that maps to chromosome 3p21.31 (8), in Saccharomyces cerevisiae by the gene CRC (9), and in Aspergillus nidulans by the gene acuH (10). The rat CAC gene was expressed in Escherichia coli and refolded in an active form (11), which opened the way to using site-directed mutagenesis to elucidate structure-function relationships of this metabolically important transporter. Recently, it was found that Cys 136 , located in loop III-IV, is accessible to membrane-impermeable reagents from the external (cytosolic) side of the proteoliposomes (12).The primary sequence of the rat CAC contains six cysteines (Cys 23 , Cys 58 , Cys 89 , Cys 136 , Cys 155 , and Cys 283 ). In this work, we aimed to determine the relationships among the six Cys residues of CAC. By functional analysis of Cys-mutants treated with SH oxidizing, cross-linking, and coordinating reagents, we have identified three cysteine residues that become close in the tertiary structure of the CAC during its catalytic cycle. They are Cys 58 , Cys 136 , and Cys 155 .
EXPERIMENTAL PROCEDURESMaterials-Sephadex G-50, G-75, and G-200 were purchased from Amersham Bioscien...