1992
DOI: 10.1016/0166-6851(92)90141-6
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The actin genes of Onchocerca volvulus

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Cited by 20 publications
(8 citation statements)
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“…The cDNA nucleotide sequence has a 236 bp 5h-UTR and carries a nematode-specific SL1 at its 5h end [18,19,[23][24][25][26][27]. The 5h-UTR of the O GR mRNA is unusually long when compared with other O. ol ulus cDNAs, such as Cu\Zn superoxide dismutases, Mn superoxide dismutase and O. ol ulus glutathione S-transferase 1, where the length of the 5h-UTR is between 0 and 76 bp [25][26][27].…”
Section: Discussionmentioning
confidence: 99%
“…The cDNA nucleotide sequence has a 236 bp 5h-UTR and carries a nematode-specific SL1 at its 5h end [18,19,[23][24][25][26][27]. The 5h-UTR of the O GR mRNA is unusually long when compared with other O. ol ulus cDNAs, such as Cu\Zn superoxide dismutases, Mn superoxide dismutase and O. ol ulus glutathione S-transferase 1, where the length of the 5h-UTR is between 0 and 76 bp [25][26][27].…”
Section: Discussionmentioning
confidence: 99%
“…To correct for differences in the quantity of starting material and the efficiency of DNA extraction, copy numbers of ftsZ were normalized against copies of the Onchocerca actin-2 genes. The DNA standards consisted of a single-stranded oligonucleotide of 103 bases from ftsZ (designed by use of a partial sequence from the endosymbiont of O. ochengi [14] and obtained by custom synthesis from Sigma-Genosys) and a plasmid vector (pCR 4-TOPO; Invitrogen) into which a 99-bp fragment of the O. volvulus actin-2B gene [25] had been cloned; these were diluted in 100 ng/mL yeast tRNA (Invitrogen), to prevent aggregation, and were used in duplicate 10-fold dilution series of -copies/ 6 Ϫ1 5 ϫ 10 5 ϫ 10 reaction. Primers and reporter-quencher fluorogenic oligonucleotides (probes) were designed by use of Primer3 software [26], in accordance with guidelines for the TaqMan system [27], and sequences and final optimal concentrations are displayed in table 1.…”
Section: Weeks After Treatmentmentioning
confidence: 99%
“…Primer and probe oligonucleotide sequences for quantification of the Wolbachia ftsZ gene relative to Onchocerca ochengi actin-2 genes (experiment 2). Target Although the actin-2 assay was based on the actin-2B gene sequence, it probably also amplified actin-2A, for which no published sequence is available [25].…”
mentioning
confidence: 99%
“…The noncoding 3Ј-end showed a consensus signal for polyadenylation (28). The 5Ј-end of the mRNA did not contain a spliced leader sequence, as confirmed by DNA sequencing and by PCR with phage DNA of the L3 library using an oligonucleotide primer corresponding to the nematode spliced leader sequence (29) and the sequence-specific primer P3.…”
Section: Characterization Of L3mentioning
confidence: 99%