ADP-ribosyltransferases
transfer ADP-ribose from β-NAD+ to acceptors; ADP-ribosylated
acceptors are cleaved by ADP-ribosyl-acceptor
hydrolases (ARHs) and proteins containing ADP-ribose-binding modules
termed macrodomains. On the basis of the ADP-ribosyl-arginine hydrolase
1 (ARH1) stereospecific hydrolysis of α-ADP-ribosyl-arginine
and the hypothesis that α-NAD+ is generated as a
side product of β-NAD+/ NADH metabolism, we proposed
that α-NAD+ was a substrate of ARHs and macrodomain
proteins. Here, we report that ARH1, ARH3, and macrodomain proteins
(i.e., MacroD1, MacroD2, C6orf130 (TARG1), Af1521, hydrolyzed α-NAD+ but not β-NAD+. ARH3 had the highest α-NADase
specific activity. The ARH and macrodomain protein families, in stereospecific
reactions, cleave ADP-ribose linkages to N- or O- containing functional
groups; anomerization of α- to β-forms (e.g., α-ADP-ribosyl-arginine
to β-ADP-ribose- (arginine) protein) may explain partial hydrolysis
of ADP-ribosylated acceptors with an increase in content of ADP-ribosylated
substrates. Af1521 and ARH3 crystal structures with bound ADP-ribose
revealed similar ADP-ribose-binding pockets with the catalytic residues
of the ARH and macrodomain protein families in the N-terminal helix
and loop. Although the biological roles of the ARHs and macrodomain
proteins differ, they share enzymatic and structural properties that
may regulate metabolites such as α-NAD+.