Staphylococcus aureus
is a major cause of hospital- and community-acquired infections placing a significant burden on the healthcare system. With the widespread of multidrug-resistant bacteria and the lack of effective antibacterial drugs, fosfomycin has gradually attracted attention as an “old drug.” Thus, investigating the resistance mechanisms and epidemiology of fosfomycin-resistant
S. aureus
is an urgent requirement. In order to investigate the mechanisms of resistance, 11 fosfomycin-resistant
S. aureus
isolates were analyzed by PCR and sequencing. The genes, including
fosA
,
fosB
,
fosC
,
fosD
,
fosX
, and
tet38
, as well as mutations in
murA
,
glpT
, and
uhpT
were identified. Quantitative real-time PCR (qRT-PCR) was conducted to evaluate the expression of the target enzyme gene
murA
and the efflux pump gene
tet38
under the selection pressure of fosfomycin. Furthermore, multilocus sequence typing (MLST) identified a novel sequence type (ST 5708) of
S. aureus
strains. However, none of the resistant strains carried
fosA
,
fosB
,
fosC
,
fosD
, and
fosX
genes in the current study, and 12 distinct mutations were detected in the
uhpT
(3),
glpT
(4), and
murA
(5) genes. qRT-PCR revealed an elevated expression of the
tet38
gene when exposed to increasing concentration of fosfomycin among 8 fosfomycin-resistant
S. aureus
strains and reference strain ATCC 29213. MLST analysis categorized the 11 strains into 9 STs. Thus, the mutations in the
uhpT
,
glpT
, and
murA
genes might be the primary mechanisms underlying fosfomycin resistance, and the overexpression of efflux pump gene
tet38
may play a major role in the fosfomycin resistance in these isolates.