Gravitational-wave observations of binary black holes provide a suitable arena to test the fundamental nature of gravity in the strong-field regime. Using the data of the inspiral of 29 events detected by the LIGO-Virgo observatories, we perform a theory-agnostic test of the Kerr hypothesis. We compute the leading-order deviation to the gravitational waves emitted in the frequency domain and provide constraints on two deformation parameters (δ1 and δ2) belonging to a general class of axisymmetric non-Kerr black hole spacetimes proposed by Konoplya, Rezzolla & Zhidenko. Our study shows that all the analyzed events are consistent with the Kerr hypothesis. The LIGO-Virgo data provide stronger constraints on δ1 and δ2 than those obtained in our previous studies with X-ray data (Papers I and II), while, on the other hand, they cannot constrain the other deformation parameters of the Konoplya-Rezzolla-Zhidenko metric (δ3, δ4, δ5, and δ6).