Photoacoustic microscopic images can assist specialists in disease diagnosis by providing vascular information. However, the size of such data is usually extremely large (ie, gigabytes), and thus, a real-time, efficient compression method can facilitate easy storage and transportation of these images. We have implemented multiple data compression methods in LabVIEW with a high compression ratio and execution times below the repetition rate of the pulsed laser. The qualitative and quantitative results of ex vivo and in vivo imaging with compression showed near-identical images to uncompressed images, with significantly smaller size.