Background
Melanoma is a highly malignant skin tumor with a poor prognosis. Identification of novel biomarkers might potentially reveal the underlying mechanisms of melanoma progression.
Methods
We demonstrated the relationship between pan-cancer
CLEC2B
expression and melanoma samples in The Cancer Genome Atlas (TCGA) database. Next, the Kaplan-Meier plot and Cox regression analysis determined the prognostic value of
CLEC2B
in melanoma. Biological pathway enrichment was screened by Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Set Enrichment Analysis (GSEA), enabling the correlation analysis between the immune infiltration level and
CLEC2B
expression in melanoma. Our final claim was validated using qPCR, immunohistochemistry, Western blot, cell colony formation assays, ethynyldeoxyuridine (Edu) analysis, and cell Invasion assays.
Results
Our study revealed that the high
CLEC2B
expression correlates with poor overall survival of melanoma patients. Moreover, a low expression of
CLEC2B
was found in the A375 cell line. In addition,
CLEC2B
has significant prognostic value in melanoma diagnosis, with an AUC of 0.896. Prognostic analysis showed the low expression of
CLEC2B
to be independently associated with melanoma patients. Moreover, the expression of
CLEC2B
was significantly correlated with B cells, eosinophils, macrophages, neutrophils, NK cells, T helper cells, Tregs, Th1 cells, Th17 cells, and Th2 cells. PCR and immunohistochemistry indicated
CLEC2B
to be significantly downregulated in melanoma. The cell colony formation assay showed
CLEC2B
knockout increased the proliferation of A375 cells.
Conclusion
Our study established low levels of
CLEC2B
to be poor prognostic markers, enabling immunosuppressive cell infiltration in melanoma.