Abstract.A novel gene of the calmodulin superfamily, encoding a 29-kD neuronal protein here named "calretinin; has been isolated as a cDNA clone from chick retina. The encoded sequence includes four putative calcium-binding sites and a fusion protein binds calcium. The most similar protein known is the 28-kD intestinal calcium-binding protein, calbindin (58% homology). Both genes date from before the divergence of chicks from mammals. The distribution of calretinin and calbindin mRNAs in chick tissues has been mapped using RNA gel blots and in situ hybridization. RNAs from both genes are abundant in the retina and in many areas of the brain, but calretinin RNA is absent from intestine and other nonneural tissues. Calretinin and calbindin are expressed in different sets of neurons throughout the brain. Calretinin RNA is particularly abundant in auditory neurons with precisely timed discharges.T HE superfamily of calcium-binding proteins, whose prototype is calmodulin, contains at least a dozen members which perform a wide variety of calciumdependent functions in different tissues. Calmodulin itself regulates several important enzymes in most cell types (34). Troponin C and the myosin light chains regulate muscle contraction (1). Parvalbumin, another muscle protein, appears to be involved in terminating fast contractions (26). Another important member of the superfamily is the 28-kD vitamin D-dependent intestinal calcium-binding protein (70), also known as cholecalcin 28k, spot 35, or visinin (47a), and now re-named calbindin DEak-hereafter "calbindin." Calbindin appears to be involved in intestinal calcium transport, but is also present in kidney, bone, and several other tissues (30,46,65). The calbindin gene has been cloned by several groups (21,27,28,71,72).Many neurons in the brains of mammals and of birds exhibit immunoreactivity for parvalbumin (7,9,13,15,17,18) or for calbindin (5,20,22,29,30,33,57). Each is present only in some neurons, commonly throughout the whole neuron including the dendritic tree and axonal terminals. They are both very abundant in the Purkinje cells of the cerebellum, and calbindin constitutes "~15 % of the soluble protein of these cells (5, 6,30,40,47,64). But elsewhere in the brain, calbindin and parvalbumin immunoreactivities are mostly in separate neurons (9,11,24). Both are also present in rat retina (17,50), and calbindin immunoreactivity is present in chick retina (25,53,58).The function of these proteins in neurons is unknown. An initial suggestion that parvalbumin was colocalized with GABA (15) has not been generally confirmed by more extensive surveys (13, 18). Parvalbumin-containing neurons do generally have rapid firing rates (9, 14). The numerous calbindin-immunoreactive cells are not known to have any common features.I now report the isolation from chick retina of an mRNA encoding a new member of the superfamily, which is expressed in the retina and in brain neurons. Because of its homology with calcium-binding proteins and its tissue of origin, I refer to the encoded p...