2011
DOI: 10.1016/j.cell.2011.10.022
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Systematic Discovery of TLR Signaling Components Delineates Viral-Sensing Circuits

Abstract: SUMMARY Deciphering the signaling networks that underlie normal and disease processes remains a major challenge. Here, we report the discovery of signaling components involved in the Toll-like receptor (TLR) response of immune dendritic cells (DCs), including a previously unkown pathway shared across mammalian antiviral responses. By combining transcriptional profiling, genetic and small molecule perturbations, and phosphoproteomics, we uncover 35 signaling regulators, including 16 known regulators, involved i… Show more

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Cited by 166 publications
(185 citation statements)
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References 64 publications
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“…We deposited all microarray data in the Gene Expression Omnibus database in the series GSE76802. Expression levels of selected genes in human macrophages stimulated with LPS (50 ng/ml) for various amounts of time (0, 0.5, 2, 4, 8, and 24 hours) in the absence or presence of LA1 (20 μM) were measured using an inflammation panel set and the nCounter Digital Analyzer (Nanostring Technologies) as previously described (76).…”
Section: Methodsmentioning
confidence: 99%
“…We deposited all microarray data in the Gene Expression Omnibus database in the series GSE76802. Expression levels of selected genes in human macrophages stimulated with LPS (50 ng/ml) for various amounts of time (0, 0.5, 2, 4, 8, and 24 hours) in the absence or presence of LA1 (20 μM) were measured using an inflammation panel set and the nCounter Digital Analyzer (Nanostring Technologies) as previously described (76).…”
Section: Methodsmentioning
confidence: 99%
“…Utilizing a combinatorial approach including transcriptomics, genetic/chemical perturbations, and phosphoproteomics, signaling components involved in the TLR response in dendritic cells were discovered systematically, particularly, Polo-like kinases (Plks) 2 and 4 were found to be important for antiviral responses both in vitro and in vivo (Chevrier et al 2011). TLR signaling is negatively regulated by various molecules at numerous levels to keep check on the excessive immune responses that can lead to detrimental consequences.…”
Section: Microbial Sensing and Signalingmentioning
confidence: 99%
“…The approach of validating the function of genes one at a time using knockout mouse models is not optimally suited to validate large numbers of genes. However, the recent development of highly parallel assessment of gene function, such as shRNA vectors or pools of siRNA, allow a more rapid functional validation of larger gene sets in vitro, and the consequent delineation of gene regulatory circuits (60)(61)(62). Such an approach is likely to yield a broad and integrated view of the complex processes set in motion by injection of a vaccine.…”
Section: Vaccines For Which There Are No Knownmentioning
confidence: 99%