Three novel Cu‐capped Ge9 clusters were synthesized from K4Ge9 and phosphane‐stabilized copper(I) compounds CuCl(PR3) with R = isopropyl (iPr) or cyclohexyl (Cy). Reactions in N,N‐dimethylformamide (dmf) at ambient temperature resulted in the isolation of [Cu(η4‐Ge9)(PCy3)]3– as a [K([2.2]crypt)] salt ([2.2]crypt: 1,7,10,16‐tetraoxa‐4,13‐diazacyclooctadecane). From solutions of [Cu(η4‐Ge9)(PiPr3)]3– in liquid ammonia, the anion was isolated when the reaction mixture was stored at –70 °C. Under the same reaction conditions but at a temperature of –40 °C the cluster [Cu(η4‐Ge9)(η1‐Ge9)]7– crystallized in the presence of [2.2.2]crypt(4,7,13,16,21,24‐hexaoxa‐1,10‐diazabicyclo[8.8.8]hexacosan)or [2.2]crypt. The ligand‐free intermetalloid cluster [Cu(η4‐Ge9)(η1‐Ge9)]7– is a unique example in which two differently bonded Ge9 units are linked by a transition‐metal atom. This cluster complex remarkably demonstrates the ability of homoatomic polyanions to bind in different modes to the same transition‐metal atom. One Ge9 nido cluster binds to the copper atom by means of its open square face, whereas the second Ge9 nido cluster is coordinated through one lone pair as a two‐electron σ donor. The key role of the flexible electron‐donor properties of [Ge9]4– in the reaction path towards the formation of intermetalliod clusters is discussed.