2023
DOI: 10.1101/2023.02.17.23286079
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Surface sampling for SARS-CoV-2 in workplace outbreak settings in the UK, 2021-22

Abstract: Aims: To utilise environmental surface sampling to evaluate areas of SARS-CoV-2 contamination within workplaces to identify trends and improve local COVID-control measures. Methods and Results: Surface sampling was undertaken at 12 workplaces that experienced a cluster of COVID-19 cases in the workforce between March 2021 and March 2022. 7.4% (61/829) of samples collected were positive for SARS-CoV-2 RNA by qPCR with only 1.8% (15/829) of samples identified with crossing threshold (Ct) values below 35.0. No sa… Show more

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Cited by 3 publications
(2 citation statements)
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“…This high-resolution approach may be especially useful in locations with high host mobility (public transit, airports or attractions), where emerging variants may be detected, as well as settings with vulnerable populations (schools, nursing homes and hospitals), where spatially resolved monitoring is crucial for guiding interventions. Unlike clinical case samples, viral genome sequencing from ambient surfaces remains a technical difficulty due to low target molecule concentrations and nucleic acid degradation on dry surfaces (Nicholls et al, 2023). However, customized extraction method and sequencing techniques (Coil et al, 2021) are expected to provide higher resolution for detection and quantification of SARS-CoV-2 variants and other viruses.…”
Section: Discussionmentioning
confidence: 99%
“…This high-resolution approach may be especially useful in locations with high host mobility (public transit, airports or attractions), where emerging variants may be detected, as well as settings with vulnerable populations (schools, nursing homes and hospitals), where spatially resolved monitoring is crucial for guiding interventions. Unlike clinical case samples, viral genome sequencing from ambient surfaces remains a technical difficulty due to low target molecule concentrations and nucleic acid degradation on dry surfaces (Nicholls et al, 2023). However, customized extraction method and sequencing techniques (Coil et al, 2021) are expected to provide higher resolution for detection and quantification of SARS-CoV-2 variants and other viruses.…”
Section: Discussionmentioning
confidence: 99%
“…For surface sampling for SARS-CoV-2 RNA, samples were collected from high touch points and other areas of interest (areas where workers congregated and workplaces throughout the site) using previously described methods [17,31]. The sampling used either Envirostik with Neutralising Buffer (Technical Service Consultants, TS/15-SH or TS/15-B) or UTM ® swabs (Copan, 366C).…”
Section: Surface Microbial Samplingmentioning
confidence: 99%