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2017
DOI: 10.1162/neco_a_00972
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Support Vector Algorithms for Optimizing the Partial Area under the ROC Curve

Abstract: The area under the ROC curve (AUC) is a widely used performance measure in machine learning. Increasingly, however, in several applications, ranging from ranking to biometric screening to medicine, performance is measured not in terms of the full area under the ROC curve, but in terms of the partial area under the ROC curve between two false positive rates. In this paper, we develop support vector algorithms for directly optimizing the partial AUC between any two false positive rates. Our methods are based on … Show more

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Cited by 30 publications
(27 citation statements)
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“…Standardized pAUC values can be used and compared like normal AUC values (Walter, 2005). Furthermore, Support Vector Machine-based estimation algorithms have been developed to optimize pAUC performance (Narasimhan and Agarwal, 2017). Better tools are needed to estimate biologically relevant sensitivity and specificity cut-off values for calculating the pAUC.…”
Section: Biomarker Discovery Process and Statisticsmentioning
confidence: 99%
“…Standardized pAUC values can be used and compared like normal AUC values (Walter, 2005). Furthermore, Support Vector Machine-based estimation algorithms have been developed to optimize pAUC performance (Narasimhan and Agarwal, 2017). Better tools are needed to estimate biologically relevant sensitivity and specificity cut-off values for calculating the pAUC.…”
Section: Biomarker Discovery Process and Statisticsmentioning
confidence: 99%
“…For instance, CALENDAR permission is introduced in 287 sentences (1.16%). Since accuracy cannot reflect the prediction performance for imbalanced dataset [45], we selected two other metrics: Area Under Curve of Receiver Operating Characteristic curve (ROC-AUC) [46], and Area Under Curve of Precision-Recall Curve (PR-AUC) [47].…”
Section: B Evaluation Metricsmentioning
confidence: 99%
“…The ROC curve is a chart that visualizes the trade-off between the true positive rate (TPR) and false-positive rate (FPR) on the different threshold [46]. ROC-AUC is the area under the ROC curve.…”
Section: B Evaluation Metricsmentioning
confidence: 99%
“…If we assume that each classifier operates at a fixed complexity level, i and i can become deterministic function of P F i by using the APP i , and the detection error trade-off (DET) curve of the classifier, which is concave and increasing and relates P D i to P F i ( P D i = f P F i ) [30,38,39]. Therefore,…”
Section: Binary Classificationmentioning
confidence: 99%