Supplementary tables from A Novel MYCN-Specific Antigene Oligonucleotide Deregulates Mitochondria and Inhibits Tumor Growth in MYCN-Amplified Neuroblastoma

Abstract

<p>supplementary tables Supplementary Table 1: List of cell lines used in this study. Supplementary Table 2: List of the primers used in this study for quantitative Real Time PCR. Supplementary Table 3: Table showing the EC50 effect for BGA001 and BGA002 (MYCN mRNA, decrease in cell viability, N-myc protein and apoptosis induction in Kelly and SK-N-BE(2)c cell lines). Supplementary Table 4: List of genes present in the Mitochondrial-related signature in alphabetical order. Supplementary Table 5: Table summarizing principal patient features and their cluster attribution. More extensive information can be seen at http://www.ebi.ac.uk/arrayexpress; accession: E-MTAB-1781. Supplementary Table 6: Table summarizing the mitoscore and its components for each gene of the mitochondrial signature; genes are order based on decreasing mitoscore. Supplementary Table 7: List of the top 200 differentially expressed genes between Cluster 1 (left) and Cluster 2 (right) Supplementary Table 8: List of Cluster 1 and Cluster 2 associated genes used for the pathway network analysis. Supplementary Table 9: List of the ClueGo pathways obtained from the pathway network analysis.</p>