Supplementary Tables 1-12 from TAp63-Regulated miRNAs Suppress Cutaneous Squamous Cell Carcinoma through Inhibition of a Network of Cell-Cycle Genes

Abstract

<p>Supplementary Table 1: Differentially expressed genes in TAp63-/- cuSCC vs. TAp63-/- skin Supplementary Table 2: Differentially expressed miRNAs in TAp63-/- cuSCC vs. TAp63-/- skin Supplementary Table 3: microRNA-mRNA pair analysis of TAp63-/- cuSCC vs. TAp63-/- skin: Underexpressed miRNAs and overexpressed mRNAs. Supplementary Table 4: microRNA-mRNA pair analysis of TAp63-/- cuSCC vs. TAp63-/- skin: Overexpressed miRNAs and underexpressed mRNAs. Supplementary Table 5: Differentially expressed mRNAs from TAp63-/- cuSCC vs cuSCC and Human cuSCC vs. skin. Supplementary Table 6: Differentially expressed miRNAs from TAp63-/- cuSCC vs cuSCC and Human cuSCC vs. skin. Supplementary Table 7: GSEA of common differentially expressed mRNAs in TAp63-/- cuSCC and human cuSCC. Supplementary Table 8: Differentially expressed proteins in miR-30c-2* mimic transfected COLO16 cells measured by TMT-6-plex LC-MS/MS. Supplementary Table 9: Differentially expressed proteins in miR-497 mimic transfected COLO16 cells measured by TMT-6-plex LC-MS/MS. Supplementary Table 10: miRNA target prediction of corresponding mRNAs for the differentially expressed proteins in the miR-30c-2* transfected COLO16 cells. Supplementary Table 11: miRNA target prediction of corresponding mRNAs for the differentially expressed proteins in the miR-497 transfected COLO16 cells. Supplementary Table 12: Overexpressed mRNAs in both mouse TAp63-/- cuSCC and human cuSCC RNA-Seq signatures</p>