Abstract:The reclamation of mine dump is largely centered on the role played by microorganisms. However, the succession of microbial community structure and function in ecological restoration of the mine soils is still poorly understood. In this study, soil samples with different stacking time were collected from the dump of an iron mine in China and the physicochemical characteristics and microbial communities of these samples were comparatively investigated. The results showed that the fresh bare samples had the lowe… Show more
“…In our research Bradyrhizobium was found in mature soil. In acid fresh mine soils, the iron/sulfur-oxidizers such as Acidiferrobacter and Sulfobacillus were reported [ 44 ].…”
Processes of soil restoration in anthropogenically disturbed soils is an urgent topic in modern ecology and nature management. Being mediator between mineral soil composition and plant vegetation, soil microbial community is important factor of soil restoration processes. Analysis of main soil nutrition components followed by 16S amplicon sequencing are sufficient methods for primary analysis of novel locations. Here is the primary analysis in a novel location in Northwest Europe (Russia). Main nutrition parameters (pH, P, Na and NH4+) and 16S rDNA Illumina amplicons were explored in abandoned soils from sandy pit quarry (2 sites) and refractory clay mining dumps (4 sites).Microbial communities of mature soils and dumps are variable and different in terms both nutritional and microbial components. pH, N and TOC are strong predictors for microbial composition. Dumps of refractory clays pQ_2 are non-developed soils, highly acidic and form specific microbial community. Differences between dumps and mature soils in both pre-quaternary and quaternary soils are connected with specific bacterial taxa. Those taxa are connected more with plant composition, not the soil properties themselves. The exact changes in microbial community are unique for different soils and areas.
Graphical Abstract
“…In our research Bradyrhizobium was found in mature soil. In acid fresh mine soils, the iron/sulfur-oxidizers such as Acidiferrobacter and Sulfobacillus were reported [ 44 ].…”
Processes of soil restoration in anthropogenically disturbed soils is an urgent topic in modern ecology and nature management. Being mediator between mineral soil composition and plant vegetation, soil microbial community is important factor of soil restoration processes. Analysis of main soil nutrition components followed by 16S amplicon sequencing are sufficient methods for primary analysis of novel locations. Here is the primary analysis in a novel location in Northwest Europe (Russia). Main nutrition parameters (pH, P, Na and NH4+) and 16S rDNA Illumina amplicons were explored in abandoned soils from sandy pit quarry (2 sites) and refractory clay mining dumps (4 sites).Microbial communities of mature soils and dumps are variable and different in terms both nutritional and microbial components. pH, N and TOC are strong predictors for microbial composition. Dumps of refractory clays pQ_2 are non-developed soils, highly acidic and form specific microbial community. Differences between dumps and mature soils in both pre-quaternary and quaternary soils are connected with specific bacterial taxa. Those taxa are connected more with plant composition, not the soil properties themselves. The exact changes in microbial community are unique for different soils and areas.
Graphical Abstract
“…The belowground microbial functional diversity is determined by dynamic, multi‐level interactions occurring between soil microbes, plants (mainly roots and biomass), and other organisms (e.g., mezofauna and endophytes). The greater the plant biodiversity, the greater the heterogeneity of organic compounds delivered to the soil, leading to a higher taxonomic and functional diversity of soil microorganisms (Ezeokoli et al, 2020; Kane et al, 2020; Kompała‐Bąba et al, 2021; Woźniak et al, 2023; Zhang et al, 2021).…”
Section: Introductionmentioning
confidence: 99%
“…Knowledge about the pioneer microorganisms accompanying the early stages of vegetation succession on the coal mine heaps is scarce. Due to adverse physicochemical and nutritional conditions, the first colonizers are photosynthetic algae, chemolithotrophic and extremophilic bacteria, and methanogenic archaea (Bąba et al, 2016; Patel & Behera, 2011; Rahmonov et al, 2022; Wang et al, 2018; Woźniak, 2010; Woźniak et al, 2022; Zhang et al, 2021). Together with organic particles and seeds brought by the wind, animals, and humans, these pioneer microorganisms might be the source of soil organic carbon for saprophytic chemoorganotrophs (Li et al, 2015; Urbanová et al, 2011; Zhang et al, 2021).…”
Section: Introductionmentioning
confidence: 99%
“…Due to adverse physicochemical and nutritional conditions, the first colonizers are photosynthetic algae, chemolithotrophic and extremophilic bacteria, and methanogenic archaea (Bąba et al, 2016; Patel & Behera, 2011; Rahmonov et al, 2022; Wang et al, 2018; Woźniak, 2010; Woźniak et al, 2022; Zhang et al, 2021). Together with organic particles and seeds brought by the wind, animals, and humans, these pioneer microorganisms might be the source of soil organic carbon for saprophytic chemoorganotrophs (Li et al, 2015; Urbanová et al, 2011; Zhang et al, 2021). Eventually, the occurrence of microbial communities and the accumulation of fine material by weathering, provide the conditions for the germination of propagules of pioneer plant species (Harantová et al, 2017; Kompała‐Bąba et al, 2019; Rahmonov et al, 2022; Woźniak et al, 2015).…”
Coal mine heaps represent unique novel environments, suitable for studying plant succession and its influence on the activity of microbes inhabiting the rhizosphere. Our aim was to verify if the functional diversity and catabolic activity of soil microorganisms would increase along with the plant succession from non‐vegetated and forbs‐dominated to grass‐dominated communities. The study was conducted on coal mine heaps located in Upper Silesia (Southern Poland), focusing on non‐vegetated patches, patches dominated by forbs–Tussilago farfara and Daucus carota (in the early stages of succession), and by grasses–Poa compressa and Calamagrostis epigejos (in later stages of primary succession). The catabolic activity and functional diversity of soil microbial communities were analyzed based on community‐level physiological profiles using BIOLOG EcoPlatesTM and the activity of dehydrogenase, alkaline phosphatase, acid phosphatase, and urease. Our results showed that spontaneous vegetation on coal mine heaps strongly affects the physicochemistry of the substrate and the functional diversity of soil microbial communities. Grasses' rhizosphere was hosting more active and functional diversified microbial communities, while non‐vegetated and T. farfara‐vegetated patches were accompanied by a reduced development of soil microbiota. Furthermore, grasses were mainly associated with a substantial delivery of plant litter to the substrate, providing a source of carbon for microorganisms.
“…The microbial communities present there are dominated by the genera Acidiferrobacter and Sulfobacillus. In old bare samples, Acidibacter, Metallibacterium, and Cyanobacteria are abundant, while the phylum Acidobacteriota prevails in the vegetated samples and promotes nutrient enrichment and plant growth significantly [13]. The assessment of the microbiological and chemical spatial distribution within two tailing basins from a tungsten mine has shown that the tailings sediments core microbiome contained members of the family Anaerolineacea and the following genera: Acinetobacter, Bacillus, Cellulomonas, Pseudomonas, Streptococcus, and Rothia [14].…”
The Urals (Russia) are among the largest mining areas in the world, with millions of tons of mine waste deposited. An old sulfidic tailing dump formed over decades of mining activities at the Sibay ore-processing plant is a typical cause of acid mine drainage (AMD) formation, posing a threat to ecosystems of neighboring environments. In this study, the formation of oxidized surface soil layers in four zones of the Sibay tailing dump was revealed, and their chemical–mineralogical and physical–mechanical characteristics were analyzed. According to the results of the metabarcoding of hypervariable regions of the 16S rRNA genes, oxidation in soil layers was associated with the activity of sulfur- and iron-oxidizing acidophiles represented by a few genera: Ferroacidibacillus, Sulfoacidibacillus, Sulfobacillus, and Ferroplasma. The structure of the microbial communities in soil layers differed depending on the zone and depth of sampling. In the samples characterized by the weak oxidation of sulfide minerals, microbial communities were dominated by bacteria of the genus Pseudomonas. The data obtained in this research are of importance to predict the oxidation/leaching processes in mine wastes and their negative environmental impacts in the mining region, as well as to develop technologies for processing these raw materials.
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