The properties of two cysteine peptidases (macrodontain I and II) isolated from fruits of Pseudananas macrodontes have been compared. The enzymes showed optimum pH ranges near neutrality and were inhibited by E-64 and other cysteine peptidase inhibitors. Molecular masses were 23459 and 23 703 kDa, the isoelectric points were 6.1 and 5.9, and the K m values were 13.4 and 8.9 μΜ (Bz-Phe-Val-Arg-AMC) for macrodontain I and II, respectively. N-a-CBZ-L-amino acid p-nitrophenyl esters were tested for both enzymes. The N-terminal sequences of both proteases differed slightly and showed high sequence similarity to other pineapple stem-derived cysteine endopeptidases. Key words: Enzyme purification and characterization/ N-terminal sequence homology/Plant endopeptidases/ Thiol proteases.Cysteine endopeptidases, which are mostly referred to as thiol proteases in older literature, have been found in viruses, bacteria, protozoa, plants and mammals and more recently were also discovered in fungi (Otto and Schirmeister, 1997). Most of the plant cysteine peptidases belong to the papain family (Family C1), including those of Bromeliaceae, the botanical family of pineapple (Barret et al., 1998). Bromeliaceae is a plant family whose members usually produce large amounts of proteases with no apparent function in plant growth and development (Boiler, 1986). To date a number of cysteine endopeptidases from species belonging to Bromeliaceae have been isolated and characterized: stem and fruit bromelain (EC 3.4.22.32 and EC 3.4.22.33, respectively), ananain (EC 3.4.22.31) and comosain, obtained from isolated from Bromelia pinguin (Toro-Goyco et al., 1968, as well as proteases from fruits of B. hemispherica, B. palmen and B. sylvestris (Cruz et al., 1974;Hernández Arana et al., 1983), Β. plumleri (Montes et al., 1990), B. hieronymi (Priolo et al., 1991), B. balansae (Pardo et al., 2000) and Pseudananas macrodontes (Natalucci et al., 1996;López et al., 2000).The present report deals with the purification and characterization of macrodontain II, a new protease from unripe fruits of Pseudananas macrodontes (Morr.) Harms (Bromeliaceae), and its comparison with macrodontain I, previously described by us .Crude extracts were obtained by homogenizing frozen unripe infrutescences of Pseudananas macrodontes in buffer containing protease protectors. A partially purified preparation ('redissolved acetone precipitate', RAP) was obtained by acetone fractionation (Natalucci et al., 1996). Isoelectric focusing (IEF) of RAP followed by zymogram showed two polypeptide bands with proteolytic activity and similar acid pi values ; both endopeptidases (macrodontain I and II) could be purified to homogeneity by FPLC (Q-Sepharose Fast Flow, pH 8.3, linear sodium chloride gradient 0.5-0.30 M). Yields were 21 % and 10% for macrodontain I and II, respectively.Macrodontain I and II were inhibited by E-64 but the proteolytic activity was not affected by characteristic inhibitors of other types of proteases (Salvesen and Nagase, 1989). As this preparation was also i...