Heparan sulfate (HS) is a sulfated polysaccharide exhibiting essential physiological functions. HS 6-O-sulfotransferase (6-OST) transfers a sulfo group to the 6-OH position of glucosamine units to confer a variety of HS biological activities. There are three different isoforms of 6-OST in the human genome. Here, we report crystal structures of the ternary complex of 6-OST with the sulfo donor analog 3′-phosphoadenosine 5′-phosphate and three different oligosaccharide substrates at 1.95 to 2.1 Å resolutions. Structural and mutational analyses reveal amino acid residues that contribute to catalysis and substrate recognition of 6-OST. Unexpectedly, the structures reveal 6-OST engages HS in a completely different orientation than other HS sulfotransferases, and sheds light on the basic HS requirements for specificity. These findings also contribute structural information to understand mutations in human 6-OST isoform 1 associated with the human genetic disease idiopathic hypogonadotrophic hypogonadism characterized by delayed or lack of puberty. Keywords oligosaccharides; heparin; sulfated carbohydrates; crystal structure Heparan sulfates (HS) are sulfated polysaccharides that are found on the surface of mammalian cells attached to core syndecan and glypican proteins and are secreted into the extracellular matrix, associated with perlecan, agrin and collagen XVIII 1, 2 . HS contains a disaccharide repeating unit of glucuronic acid (GlcA) or iduronic acid (IdoA) and glucosamine (GlcN). Both IdoA and GlcN are capable of carrying sulfo groups, while GlcA can be sulfated to a lesser extent. HS play important roles in a wide range of physiological
HHS Public AccessAuthor manuscript ACS Chem Biol. Author manuscript; available in PMC 2018 January 20.
Author Manuscript Author ManuscriptAuthor Manuscript Author Manuscript and pathophysiological functions including assisting in viral/bacterial infection, inflammatory responses, blood coagulation, angiogenesis, and embryonic development 3 . Notably, HS is implicated in the formation of amyloid plaques contributing to Alzheimer's disease 4 . HS carry out their wide range of functions through interactions with proteins such as growth factors, protease inhibitors, proteases, cytokines, chemokines and morphogens 1, 2, 5 . Many of these interactions rely on distinctive sulfated saccharide sequences in HS for high specificity.The HS 6-O-sulfotransferase isoforms (6-OSTs) are members the HS biosynthetic enzyme family that transfer a sulfo group from 3′-phosphoadenosine 5′-phosphosulfate (PAPS) to the 6-OH of GlcN. HS biosynthesis occurs in the Golgi and endoplasm reticulum and involves glycosyltransferases, an epimerase and several sulfotransferases. A backbone polysaccharide with a disaccharide repeating unit of GlcA and N-acetyl glucosamine (-GlcA-GlcNAc-) is initially synthesized by HS polymerase. The backbone polysaccharide then undergoes a series of modifications ( Supplementary Figure 1) 6 . In general, modification begins with N-deacetylation/N-sulfation by the N-dea...