In this paper we analyze near-infrared thermal emission spectra of the spatially resolved nucleus of Comet 9P/Tempel 1 obtained by the NASA spacecraft Deep Impact. Maps of spectral reddening, the product X between the beaming function and directional emissivity, as well as surface temperature are constructed. Thermophysical modeling is used to estimate the degree of small scale surface roughness and thermal inertia by detailed reproduction of the Surface variations in reddening, roughness, thermal inertia, composition and/or grain size are moderately to strongly correlated to the locations of morphological units on the surface.The existence of morphological units with differing physical properties may be primordial, hence reflecting a diversity in the building block cometesimals, or resulting from evolutionary processes.