The polycistronic puf operon of Rhodobacter capsulatus encodes protein components for the photosynthetic reaction center and one of the two antenna complexes involved in the capture of light energy. We report here that deletions within specific puf genes alter the synthesis and/or assembly in the photosynthetic membranes of pigment-protein complexes not affected genetically by the deletion. The puJX gene is required for normal ratios of antenna complexes, and its deletion results in an increase of membrane-bound light-harvesting I (LHI) complex-specific proteins. Expression of pufQ in strains deleted for the genes encoding the LHI and the photosynthetic reaction center (RC) yields a novel A8. peak that has not been associated with any of the pigment-protein complexes described previously. While deletions in the RC-coding region resulted in decreased LHI absorbance, no quantitative alteration in membrane-bound LHI protein was observed, suggesting that an intact RC complex is required for correct assembly of LHI in the membrane.At least two different light-harvesting (antenna) complexes are involved in transferring energy to the photosynthetic reaction center (RC) in Rhodobacter capuslatus. The lightharvesting I (LHI) or B870 complex is found in the photosynthetic membrane in a constant molar ratio of about 12:1 relative to the RC complex (12), whereas the amount of LHII or B800-850 complex is variable and depends on growth conditions. Cells grown either under high oxygen tension or anaerobically under high light intensity lack the B800-850 complex, which can be found in 100-fold excess over RC in cultures under low oxygen tension (15,18,19). The antenna complexes and the RC each contain two pigment-binding proteins; non-pigment-binding proteins are additionally found in LHII and the RC complex. It has been suggested that the RC is associated with LHI oligomers in the membrane and that oligomers of the LHII complex surround both (9).The requirements for the correct assembly of pigments and pigment-binding proteins into photochemically functional complexes have been the subject of extensive investigation during recent years. Studies of mutant strains have shown that blocking the synthesis of some components of the photosynthetic apparatus can affect the synthesis and/or assembly of other components. Mutants blocked in early steps in bacteriochlorophyll (Bchl) synthesis lack pigmentbinding proteins in the membrane (13). Although mutants defective in late steps of Bchl synthesis can synthesize pigment-binding proteins and insert them into photosynthetic membranes, the proteins are unstable and undergo rapid turnover (7,13 Bacteriol., in press) that appears to be involved in the synthesis of Bchl (C. E. Bauer and B. L. Marrs, Proc. Natl. Acad. Sci. USA, in press) and a gene, X (26), of unknown function. In the present study, we examined the effects of specific puf operon deletions on the presence of various pigment-protein complexes in R. capsulatus photosynthetic membranes. Our results indicate that mutations in bo...