Poliovirus cDNA RNA hybrids were prepared from the Mahoney strain ofpoliovirus type 1 by using reverse transcriptase (RNA-dependent DNA nucleotidyltransferase) and cloned in the Escherichia coliplasmidpBR322. Bacteria colonies carrying recombinant plasmids were selected by in situ hybridization with virus-specific RNase Ti-resistant oligonucleotides. Analysis of the cDNA inserts by restriction mapping and electron microscopy showed that the cloned cDNAs, the longest of which was 3.2 kIlobase pairs, originated from various parts of the viral RNA, covering at least 99% ofthe genome length. Due to overlapping ofthe clones, the restriction map of the poliovirus genome could be reconstructed. The complete 5' end of the genome was successfully cloned in at least one of the recombinant plasmids, pPVl-366.The genome of poliovirus is a polyadenylylated RNA of plusstrand polarity. Its 5' end is covalently attached to a small viral protein (VP) termed VPg (for review, see ref. 1). The complete sequence of poliovirus type 1 (PV-1) RNA has recently been determined (2). Poliovirus has a unique strategy ofgene expression; its primary translation product is a 220,000-dalton polyprotein, noncapsid VP (NCVP) NCVP00, that is processed into numerous polypeptides by proteinase(s) (3). Most of the viral polypeptides have been mapped; the capsid proteins are encoded in the 5'-terminal halfofthe genome in the order 5'-VP4-VP2-VP3-VP1, whereas nonstructural proteins such as NCVP X, a putative proteinase, and NCVP4, the viral RNA polymerase (4, 5), are encoded in the middle and the 3' part of the genome, respectively (2, 3). However, the functions of many viral polypeptides are still obscure. Also, little is known about the regulation of proteolytic processing or the mechanism of RNA replication.Recombinant DNA technology allows synthesis and cloning in Escherichia coli of double-stranded cDNA copies of a viral RNA genome. The availability of such clones would be helpful for detailed analysis of the organization of the poliovirus genome, including confirmation of the nucleotide sequence information obtained by other means. In addition, the expression of virus-specific proteins in E. coli may open the way to the development of new types of vaccine. This is desirable in view of the fact that vaccination with both killed and live poliovirus has met with difficulties, particularly in tropical countries. Finally, should expression of cloned poliovirus cDNA in eukaryotic cells prove possible, the system would offer a unique opportunity for in vitro site-directed mutagenesis and thus for genetic analyses of the virus.In this paper, we report the isolation of PV-1 cDNA clones that together cover 99% of the viral genome, and we present a restriction map of poliovirus-specific DNA.
MATERIALS AND METHODSConstruction and Screening of Clones Containing Recombinant DNAs. The Mahoney strain of PV-1 was grown in suspension cultures of HeLa cells, and viral RNA was extracted as described (6). cDNA was prepared by using an oligo(dT)10 primer and ...