2017
DOI: 10.1017/s1431927617006985
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Structure Analysis of a Sugar-moiety Chimera of EmaA, a Collagen Adhesin of a Gram-negative Bacterial Pathogen

Abstract: The gram-negative non-motile bacterium, Aggregatibacter actinomycetemcomitans is an oropharyngeal colonizer. A. actinomycetemcomitans causes aggressive periodontitis and systemic infections, including endocarditis and pneumonia. Multiple virulence factors are involved in the infective process, and EmaA (extracellular matrix adhesin A) is one of the important virulence determinants in the early stage of infection. EmaA is a trimeric autotransporter adhesin, composed of three 202 kDa monomers, and forms antenna-… Show more

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Cited by 2 publications
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“…Projections were initially aligned by cross correlation and further refined using fiducial markers located outside of the bacterial surface. EmaA functional domains were orientationally selected from the tomograms by marking two points along their long axis (11, 12, 17, 23) with the first point located at the tip of the adhesin. For each selected molecule, a tilt series of subprojections was extracted, subprojection angles were recalculated and subvolumes were reconstructed with the molecules’ long-axis oriented approximately parallel to the Y-axis using algorithms implemented in EMIRA (15).…”
Section: Methodsmentioning
confidence: 99%
“…Projections were initially aligned by cross correlation and further refined using fiducial markers located outside of the bacterial surface. EmaA functional domains were orientationally selected from the tomograms by marking two points along their long axis (11, 12, 17, 23) with the first point located at the tip of the adhesin. For each selected molecule, a tilt series of subprojections was extracted, subprojection angles were recalculated and subvolumes were reconstructed with the molecules’ long-axis oriented approximately parallel to the Y-axis using algorithms implemented in EMIRA (15).…”
Section: Methodsmentioning
confidence: 99%