How intracellular organelles acquire their characteristic sizes is a fundamental cell biological question. Given the stereotypical changes in nuclear size in cancer, it is particularly important to understand the mechanisms that control nuclear size in human cells. Here we use a high-throughput imaging RNAi screen to identify and mechanistically characterize ELYS, a nucleoporin required for postmitotic nuclear pore complex (NPC) assembly, as a determinant of nuclear size in mammalian cells. We show that ELYS knockdown results in small nuclei, the accumulation of cytoplasmic lamin aggregates, reduced nuclear lamin B2 localization, lower NPC density, and decreased nuclear import. Increasing nuclear import by importin α overexpression rescues nuclear size and lamin B2 import, while inhibiting importin α/β nuclear import decreases nuclear size. Conversely, ELYS overexpression leads to increased nuclear size, enrichment of nuclear lamin B2 staining at the nuclear periphery, and elevated NPC density and nuclear import. Consistent with these observations, knockdown or inhibition of exportin 1 increases nuclear size. In summary, we identify ELYS and NPC density as novel positive effectors of mammalian nuclear size and propose that nuclear size is controlled by nuclear import capacity.
INTRODUCTIONA fundamental question in cell biology is how intracellular organelles acquire their characteristic sizes. Organelle size almost certainly impacts function. For instance, expansion of the endoplasmic reticulum (ER) occurs in response to the need for increased protein synthesis or folding [1-3]. Depending on cell-size and -type, Golgi and mitochondrial volumes must be sufficient to support cellular metabolic requirements [4-8]. The functional significance of nuclear size is a particularly important problem. Changes in nuclear size are used to diagnose and stage many forms of cancer [9-12], yet it is unknown if these nuclear size changes contribute to the disease pathology or result from it. Addressing this question requires a comprehensive understanding of the mechanisms that control nuclear size in normal and cancerous mammalian cells.The nuclear envelope (NE) is composed of an enclosed double lipid bilayer that is continuous with the ER on the exterior and lined on the inside by multiple proteins that constitute the nuclear lamina, most notably nuclear lamins [13]. Inserted into the NE are nuclear pore complexes (NPCs) that mediate nucleocytoplasmic transport of proteins and RNA [14][15][16][17]. The NPC is a large protein complex composed of multiple copies of ~30 different proteins termed nucleoporins (Nups), and distinct mechanisms are responsible for assembling NPCs into the NE after mitosis and for inserting NPCs into the NE during interphase [18,19]. Classical nuclear import is mediated by importin α/β karyopherins that transport cargos through the NPC and into the nucleoplasm where RanGTP induces cargo release through importin β binding. The three major nuclear lamins (lamin A/C, B1, and B2) are imported through this pat...