Ultracold 87 Rb atoms are delivered into a high-finesse optical micro-cavity using a translating optical lattice trap and detected via the cavity field. The atoms are loaded into an optical lattice from a magneto-optic trap (MOT) and transported 1.5 cm into the cavity. Our cavity satisfies the strong-coupling requirements for a single intracavity atom, thus permitting real-time observation of single atoms transported into the cavity. This transport scheme enables us to vary the number of intracavity atoms from 1 to >100 corresponding to a maximum atomic cooperativity parameter of 5400, the highest value ever achieved in an atom-cavity system. When many atoms are loaded into the cavity, optical bistability is directly measured in real-time cavity transmission.Many applications in quantum information science require the coherent and reversible interaction of single photon fields with material qubits such as trapped atoms. Quantum states can be transferred between light and matter-respectively offering long range communication and long-term storage of quantum information. This important paradigm is the heart of cavity QED systems, which are largely focused on creating laboratory systems capable of reversible matter-photon dynamics at the single photon level [1]. To achieve this, a small high-finesse build-up cavity is used to tremendously enhance the electric field per photon and hence the interaction strength of a single photon with the cavity medium (e.g. atoms). For a single atom in the cavity, the interaction strength is given by the single photon Rabi frequency, 2g 0 , and coherent dynamics is achieved for g 2 0 /(κΓ) ≫ 1, where κ is the the cavity field decay rate and Γ is the atomic spontaneous emission rate.There have been spectacular recent successes in cavity QED research brought about by the merging of optical cavity systems with ultracold neutral atoms [2], including real-time observation [3,4,5] and trapping [6,7,8,9] of single atoms in optical cavities, real-time feedback control on a single atom [10], and single photon generation [11,12]. Together with the remarkable experimental work in microwave cavity QED [13] and the future prospects for cavity QED with trapped ions [14,15], the field is well-poised to contribute significantly to the development of quantum information science. Indeed, current cavity QED parameters are sufficient for existing quantum gate protocols with fidelities > 99.9% percent [16,17,18,19], and the systems are principally limited by the lack of a scalable atomic trapping system to provide adequate control over atom motional degrees of freedom.Our strategy for overcoming this limitation is to employ optical dipole trapping fields independent from the cavity and orthogonal to its axis as illustrated in Fig.