Abstract:We propose a new deterministic methodology to predict RNA sequence and protein folding. Is stem enough for structure prediction? The main idea is to consider all possible stem formation in the given sequence. With the stem loop energy and the strength of stem, we explore how to deterministically utilize stem information for RNA sequence and protein folding structure prediction. We use graph notation, where all possible stems are represented as vertices, and co-existence as edges. This full Stem-graph presents … Show more
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