Search citation statements
Paper Sections
Citation Types
Year Published
Publication Types
Relationship
Authors
Journals
Conformational isomerization of 5-methyl-and 2,2,5-trimethyl-1,3-dithianes was studied using quantum-chemical HF/6-31G(d), HF/pVDZ, and PBE/3z approximations. The potential energy surface of molecules of both compounds is shown to contain the main minimum corresponding to the equatorial chair conformer C-5e. The calculated potential barriers of the conformational isomerization were found. Based on the experimental ( 1 H NMR) and theoretical vicinal coupling constants the ΔG 0 values were determined of the methyl group at the ring C 5 atom. The reasons for the distinctions between the values of this parameter from the ΔG 0 , obtained by energy minimizations of the equatorial and axial chair conformers are discussed.The interest in substituted 1,3-dithianes are due both to the peculiarities of their structure [1][2][3][4][5][6][7][8][9][10][11] and to their use as reagents in fine organic synthesis [12][13][14][15][16][17][18][19]. Earlier using 1 H and 13 C NMR spectroscopy it has been shown that the main minimum on the potential energy surface (PES) of 5-alkyl-1,3-dithianes is the equatorial chair conformer (C e ) [2, 3, 5-9]. Computer simulation applied to the conformational analysis of unsubstituted 1,3-dithiane has revealed the main conformer, the chair (C), and the local minima, 1,4-twist (1,4-T) and 2,5-twist (2,5-T), as well as transition states (TS): the semi-chair, symmetric boat and asymmetric boat conformations [20,21]. In this paper conformational analysis is performed of the molecules of 5-methyl-(I) and 2,2,5-trimethyl-1,3-dithianes (II) using ab initio quantum chemical approximations HF/6-31G(d), HF/pVDZ, and PBE/3z within the HyperChem [22] and PRIRODA [23] software packages.compounds I and II contains five minima: the equatorial chair and axial chair conformers (C e , C a ), as well as flexible conformers, 1,4-T and two enantiomeric forms of 2,5-T. The overall picture of the conformational transitions in this case corresponds to a trigonal bipyramid.Note that all the used approximations show only one of the two possible 1,4-T forms, with pseudoequatorial methyl group at the C 5 atom of the ring. In the course of the geometry optimization and energy minimization the alternative conformer is irreversibly converted into 2,5-T form.Analysis of the calculated parameters of the conformational equilibria of studied 1,3-dithianes (Table 1) shows that the difference in the energy of C e and C a forms (ΔH) is 1.2-1.5 kcal mol -1 , except for the case of HF/pVDZ approximation. Accordingly, the value of ΔG 0 for the C e ↔ C a equilibrium is equal to 1.3-1.4 kcal mol -1 (PBE/3z). However, the calculated value of ΔH for similar conformers of 5-methyl-1,3-dioxane in the framework of the HF/6-31G(d) does not exceed 0.6 kcal mol -1 [25] . The large value of this parameter for compounds I and II is difficult to explain by steric interactions of the axial methyl group at the C 5 atom with the heteroatomic ring fragment, because an increase in the C-S bond length compared with C-O, should, conversely, reduce the ΔH a...
Conformational isomerization of 5-methyl-and 2,2,5-trimethyl-1,3-dithianes was studied using quantum-chemical HF/6-31G(d), HF/pVDZ, and PBE/3z approximations. The potential energy surface of molecules of both compounds is shown to contain the main minimum corresponding to the equatorial chair conformer C-5e. The calculated potential barriers of the conformational isomerization were found. Based on the experimental ( 1 H NMR) and theoretical vicinal coupling constants the ΔG 0 values were determined of the methyl group at the ring C 5 atom. The reasons for the distinctions between the values of this parameter from the ΔG 0 , obtained by energy minimizations of the equatorial and axial chair conformers are discussed.The interest in substituted 1,3-dithianes are due both to the peculiarities of their structure [1][2][3][4][5][6][7][8][9][10][11] and to their use as reagents in fine organic synthesis [12][13][14][15][16][17][18][19]. Earlier using 1 H and 13 C NMR spectroscopy it has been shown that the main minimum on the potential energy surface (PES) of 5-alkyl-1,3-dithianes is the equatorial chair conformer (C e ) [2, 3, 5-9]. Computer simulation applied to the conformational analysis of unsubstituted 1,3-dithiane has revealed the main conformer, the chair (C), and the local minima, 1,4-twist (1,4-T) and 2,5-twist (2,5-T), as well as transition states (TS): the semi-chair, symmetric boat and asymmetric boat conformations [20,21]. In this paper conformational analysis is performed of the molecules of 5-methyl-(I) and 2,2,5-trimethyl-1,3-dithianes (II) using ab initio quantum chemical approximations HF/6-31G(d), HF/pVDZ, and PBE/3z within the HyperChem [22] and PRIRODA [23] software packages.compounds I and II contains five minima: the equatorial chair and axial chair conformers (C e , C a ), as well as flexible conformers, 1,4-T and two enantiomeric forms of 2,5-T. The overall picture of the conformational transitions in this case corresponds to a trigonal bipyramid.Note that all the used approximations show only one of the two possible 1,4-T forms, with pseudoequatorial methyl group at the C 5 atom of the ring. In the course of the geometry optimization and energy minimization the alternative conformer is irreversibly converted into 2,5-T form.Analysis of the calculated parameters of the conformational equilibria of studied 1,3-dithianes (Table 1) shows that the difference in the energy of C e and C a forms (ΔH) is 1.2-1.5 kcal mol -1 , except for the case of HF/pVDZ approximation. Accordingly, the value of ΔG 0 for the C e ↔ C a equilibrium is equal to 1.3-1.4 kcal mol -1 (PBE/3z). However, the calculated value of ΔH for similar conformers of 5-methyl-1,3-dioxane in the framework of the HF/6-31G(d) does not exceed 0.6 kcal mol -1 [25] . The large value of this parameter for compounds I and II is difficult to explain by steric interactions of the axial methyl group at the C 5 atom with the heteroatomic ring fragment, because an increase in the C-S bond length compared with C-O, should, conversely, reduce the ΔH a...
Ab initio molecular orbital theory with the 6-31G(d), 6-31G(d,p), 6-31+G(d), 6-31+G(d,p), and 6-311+G(d,p) basis sets and density functional theory (BLYP, BP86) including the hybrid density functionals B3LYP, B3P86, and B3PW91 have been used to investigate stereoelectronic hyperconjugative interactions and relative energies of the chair, 1,4-twist, and 2,5-twist conformers of 1,3-dithiane (1,3-dithiacyclohexane). The HF/6-31G(d) energy difference (ΔE) between the chair conformer and the 1,4-boat transition state was 5.53 kcal/mol, and the B3LYP/6-311+G(d,p) energy difference between the chair conformer and the 2,5-boat transition state was 5.42 kcal/mol. Intrinsic reaction coordinate (IRC, minimum energy path) calculations have been used to connect the enantiomers of the 1,4-twist conformer via the 2,5-boat transition state. The B3LYP/6-311+G(d,p) calculated energy difference between the 1,4-twist conformer and the 2,5-boat transition state was 0.80 kcal/mol. The HF/6-31G(d) energy difference (ΔE) between the chair conformer and the 2,5-twist conformer was 4.24 kcal/mol, and the 2,5-twist conformer was 0.48 kcal/mol lower in energy than the 1,4-twist conformer. The chair−1,4-twist free energy difference (Δ ) is 4.42 kcal/mol, and the chair−2,5-twist Δ is 4.27 kcal/mol. IRC calculations connected the chair conformer and 2,5-twist conformer on the potential energy surface by a path that passes through the transition state [TS-1]‡ between them. IRC reaction path computations also connected transition state [TS-2]‡ to the chair conformer and the 1,4-twist conformer. The transition state [TS-2]‡ between the chair and the 1,4-twist conformers is 9.89 kcal/mol higher in energy than the chair conformer, and the transition state [TS-1]‡ between the chair and the 2,5-twist conformers is 10.44 kcal/mol higher in energy than the chair conformer. The C2−Hax, C4−Hax, and C6−Hax bond lengths are longer than the corresponding C−Heq bond lengths in the chair conformer (LPS → σ*C - Hax, σ C - Hax → σ* C - Hax). In contrast, the C5−Heq bond in the chair conformer is longer than the C5−Hax bond (σS - C → σ*C5 - Heq, W effect, or homoanomeric LPS → σ*C5 - Heq). The importance of geometrical considerations in stereoelectronic hyperconjugative interactions is shown in the twist conformers and transition states of 1,3-dithiane. Unlike the chair conformer, in the 2,5-twist conformer, the respective C−H bond lengths at each carbon are equal and the C2−Hiso bond lengths are shorter than the C5−Hiso bond lengths. In the 1,4-twist conformer, the respective C−H bond lengths at C2, C4, and C6 are equal and the C5−Heq bond length is longer than the C5−Hax bond length (σS - C → σ*C5 - Heq, W effect, or homoanomeric LPS → σ*C5 - Heq).
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
hi@scite.ai
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.