“…Samples were positioned on agar in 15 mm nuclear magnetic resonance tubes, and degassed under dark conditions to remove bubbles prior to interrogation. ParaVision v5.1 was used to run chemical shift selective imaging (mic chess) (Ha et al, 2015;Lone et al, 2015a) and 2D diffusion-mapping experiments (DtiStandard) (Lone et al, 2015b), both with a resolution of 78 × 156 μm. Scalar irradiance (photosynthetically active radiation) profiles were measured in quadruplicate with isotropic photosynthetically active radiation microsensors with spherical 70 μm diameter tips (Zensor, Åls-gårde, DK) fiber optically connected to a spectrophotometer (USB2000+-ES, Ocean Optics, Dunedin, FL, USA) and inter-calibrated against a radiometer (LI-250A and LI-COR Quantum sensor, LI-COR Biosciences, Lincoln, NE, USA) (Lassen et al, 1992).…”