Design of efficient and environmentally benign zeolitic materials at the nanoscale is becoming increasingly important for a range of industrial applications. Here we report a high resolution transmission electron microscopy investigation of the atomic level structure of zeolite beta synthesized without an organic structure-directing agent (OSDA). Direct visualization of zeolite beta crystals confirmed them to be essentially defect free, with domain boundaries the only disruption to the pore channel network. Direct visualization enabled the distribution of BEA and BEB polytype subdomains to be quantified, and the overall abundance ratio was calculated to be BEA:BEB = 9:11. By assuming this ratio corresponds to the probability of forming a new BEA or BEB layer on a (001) surface at the tip of a crystal, the experimentally observed polytype distributions can be described by a simple probability function, suggesting that epitaxial crystal growth occurs stochastically in a state close to chemical equilibrium.