Rabs constitute the largest family of monomeric GTPases, yet for the majority of Rabs relatively little is known about their activation and recruitment to vesicle-trafficking pathways. We recently identified connecdenn (DENND1A), which contains an N-terminal DENN (differentially expressed in neoplastic versus normal cells) domain, a common and evolutionarily ancient protein module. Through its DENN domain, connecdenn functions enzymatically as a guanine-nucleotide exchange factor (GEF) for Rab35. Here we identify two additional connecdenn family members and demonstrate that all connecdenns function as Rab35 GEFs, albeit with different levels of activity. The DENN domain of connecdenn 1 and 2 binds Rab35, whereas connecdenn 3 does not, indicating that Rab35 binding and activation are separable functions. Through their highly divergent C termini, each of the connecdenns binds to clathrin and to the clathrin adaptor AP-2. Interestingly, all three connecdenns use different mechanisms to bind AP-2. Characterization of connecdenn 2 reveals binding to the 2-ear of AP-2 on a site that overlaps with that used by the autosomal recessive hypercholesterolemia protein and arrestin, although the sequence used by connecdenn 2 is unique. Loss of connecdenn 2 function through small interference RNA knockdown results in an enlargement of early endosomes, similar to what is observed upon loss of Rab35 activity. Our studies reveal connecdenn DENN domains as generalized GEFs for Rab35 and identify a new AP-2-binding motif, demonstrating a complex link between the clathrin machinery and Rab35 activation.
Clathrin-mediated endocytosis (CME)3 is a major mechanism for internalization of proteins and lipids. Clathrin-coated vesicles (CCVs) form at the plasma membrane and deliver their cargo to early endosomes from were it either recycles or is targeted for degradation. Central to the formation of CCVs at the plasma membrane is the clathrin adaptor protein 2 (AP-2). AP-2 is a heterotetramer consisting of two large subunits, ␣ and 2, a medium sized 2 subunit, and a small 2 subunit. The ␣ and 2 subunits each contain an N-terminal trunk domain, which along with 2 and 2 form the core of AP-2. In addition, ␣ and 2 contain C-terminal, ϳ30-kDa ear (or appendage) domains, separated from the trunk by flexible linkers. The core of AP-2 targets it to the plasma membrane, whereas the 2-ear and linker bind and promote the polymerization of clathrin. The ␣-and 2-ear domains serve as recruitment hubs, binding accessory proteins and bringing them to sites of CCV formation (1).Despite low sequence homology, the ␣-and 2-ears have a similar bi-lobed structure, consisting of N-terminal sandwich and C-terminal platform subdomains (2-4). Each of the four subdomains binds to specific peptide motifs, allowing the ears to recruit a wide variety of accessory proteins. The presence of four distinct binding sites, each of which has a different binding affinity, is likely important for the correct temporal ordering during the recruitment of endocytic accessor...