Introduction: Arterial blood gas analysis (ABG) is the gold standard test for carbon dioxide measurement. End-tidal PCO 2 (PetCO 2) and transcutaneous PCO 2 (PtcCO 2) are noninvasive alternative methods. Objective: To examine the use of PetCO 2 and PtcCO 2 as PaCO 2 surrogates in awake children. Methods: A prospective observational study. Consecutive awake children in a stable condition referred to the Sleep Unit of Hospital de Pediatría Dr. J. P. Garrahan with suspected or confirmed sleep-related respiratory disorders requiring ABG were included. PetCO 2 and PtcCO 2 were recorded simultaneously during arterial puncture. PetCO 2 and PtCO 2 values were compared with PaCO 2. Correlation coefficient and Bland-Altman analysis were applied. The sample size was calculated considering a mean difference ≤3 mmHg as clinically acceptable. Results: Sixty-eight sample sets were obtained from 67 patients. The median age was 9.11 years (0.23-18.76). During 94.1% of the procedures patients breathed spontaneously, 30% needed multiple punctures and 92% resulted in pain. Median (IQR) PaCO 2 (mmHg) was 36.3 (31.45; 40.90), PetCO 2 33.0 (29; 39) and PtcCO 2 38.8 (32.95; 43.32). Correlation and agreement for PaCO 2 /PetCO 2 and PaCO 2 / PtcCO 2 was r = .6 and .9, and media of bias = 2.83 (−9.97; 15.64) and −1.88 (−9.01; 5.24), respectively. Hypercapnia (PaCO 2 > 45.0 mmHg) was present in 8/68 (11.8%) samples. Sensitivity, specificity, positive predictive value and negative predictive value to detect hypercapnia with PetCO 2 was 38%, 98%, 75%, and 92%, respectively, and with PtcCO 2 , 100%, 90%, 57%, and 100%, respectively. Conclusion: PtcCO 2 showed better agreement with PaCO 2 than PetCO 2 but because of the wide dispersion of values, neither method can replace the gold standard. Transcutaneous CO 2 might be a good screening tool to detect hypercapnia in awake children.