Heterozygous in-frame mutations (p.E2207del and p.R2308_M2309dup) in the a-II subunit of spectrin (SPTAN1) were recently identified in two patients with intellectual disability (ID), infantile spasms (IS), hypomyelination, and brain atrophy. These mutations affected the C-terminal domain of the protein, which contains the nucleation site of the a/b spectrin heterodimer. By screening SPTAN1 in 95 patients with idiopathic ID, we found a de novo in-frame mutation (p.Q2202del) in the same C-terminal domain in a patient with mild generalized epilepsy and pontocerebellar atrophy, but without IS, hypomyelination, or other brain structural defects, allowing us to define the core phenotype associated with these C-terminal SPTAN1 mutations. We also found a de novo missense variant (p.R566P) of unclear clinical significance in a patient with non-syndromic ID. These two mutations induced different patterns of aggregation between spectrin subunits in transfected neuronal cell lines, providing a paradigm for the classification of candidate variants. European Journal of Human Genetics (2012) 20, 796-800; doi:10.1038/ejhg.2011.271; published online 18 January 2012 Keywords: intellectual disability; epilepsy; SPTAN1; pontocerebellar atrophy
INTRODUCTIONThe targeting and maintenance of groups of proteins at specific membrane domains of neurons, such as the synapse and the axon, are critical for the brain function and development. Not surprisingly, mutations in proteins that participate in the assembling of these domains, such as the spectrins, have been shown to cause neurological disorders. Spectrins consist of a-and b-subunits that form antiparallel heterodimers, which are assembled to form heterotetramers in a headto-head configuration. 1,2 Heterozygous mutations in the b-III subunit (SPTBN2) were shown to cause spinocerebellar ataxia type-5. 3 Recently, de novo in-frame mutations in the a-II spectrin subunit (SPTAN1) were identified in patients with severe intellectual disability (ID), infantile spasms (IS) with hypsarrhythmia, hypomyelination, and atrophy of various regions of the brain, including the cerebellum and brainstem. 4 These mutations are located in a C-terminal domain that includes the nucleation site involved in a/b spectrin heterodimer formation. 5 Biochemical studies indicated that these mutations destabilized this interaction, leading to aggregation of a-II(mut)/b-II and a-II(mut)/b-III spectrin heterodimers in mouse cortical neurons and in lymphoblastoid cells from the patients. 4 Recent studies suggest that de novo point mutations in the germ line, which in humans are estimated to occur at a rate of B1.1Â10 À8 per base, may explain a large fraction of ID cases. [6][7][8] In the course of a project aimed to identify such mutations in candidate synaptic genes,