Rhodopsin is a vertebrate dim-light photoreceptor consisting of a seven-helical transmembrane opsin protein and a chromophore, 11-cis retinal, linked to the protein via a protonated Schiff base (PSB). 1 Following photon absorption, 11-cis retinal isomerizes to the all-trans configuration to initiate the visual transduction cascade. Since optimal transduction depends on the thermal stability of rhodopsin, the thermal decay process has long been a subject of interest, yet the chemistry behind it has remained unclear. [2][3][4] Baylor et al. demonstrated that the thermal isomerization of rhodopsin, which enhances dark noise and reduces photosensitivity, generates the same physiological response as photoisomerization. 5,6 Furthermore, rhodopsin was reported to undergo thermal decay characterized by a decrease in visible absorption at 500 nm and an increase in UV absorption at 380 nm upon incubation at 37-55°C. 7,8 The observed thermal decay was attributed to hydrolysis of the PSB. Further analysis by HPLC showed that the concentration of all-trans retinal extracted from rhodopsin increased after incubation in the dark at 55°C. In this case, the thermally-induced isomerization from 11-cis to all-trans was proposed to be initiated by a different process -thermal denaturation. 9 We recently proposed that a hydrogen-bonding network at the retinal binding site 10 is involved in the counterion switch between dark state rhodopsin and metarhodopsin I, an intermediate precursor to transducin photoactivation. 11,12 This theory has prompted our current investigation of the thermal properties of the putative hydrogen-bonding network through solvent deuterium isotope effects. In this report, we attempt to clarify and characterize the chemical reactions responsible for the thermal decay process, with particular emphasis on (1) thermal decay marked by a decrease in optical density at 500 nm (OD 500 ), (2) thermal isomerization of 11-cis to all-trans retinal, and (3) hydrolysis of the PSB. Our results suggest that although PSB hydrolysis and retinal isomerization affect the thermal decay of rhodopsin, denaturation of the secondary structure is not significant. Moreover, we discover that the rates of thermal decay, isomerization, and PSB hydrolysis are two-to three-fold slower in D 2 O than H 2 O. Based on these results, we conclude that the rate-determining step of these thermal processes involves the breaking of hydrogen bonds, which probably stabilize the tertiary structure of rhodopsin, thereby contributing to the high thermal stability.To examine the kinetics of thermal decay, we measured differences in the UV-vis absorption of rhodopsin at appropriate time intervals at 59°C to determine the rates of thermal decay in * elsa.yan@yale.edu.Supporting Information Available: Experimental details (PDF) are available free of charge via the Internet at http://pubs.acs.org. Figure 1A and B). Absorption at 280 nm corresponds to the aromatic amino acids of opsin, while the signal at 500 nm corresponds to rhodopsin with the 11-cis retinal...