Species composition and distribution of butterfishes (Stromateidae) in waters of Russia

Долганов, В. Н.; Kharin, V. E.; Земнухов, В. В.

doi:10.1134/s0032945207080048

Cited by 15 publications

(10 citation statements)

References 2 publications

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“…The original description lacks some of the important diagnostic characteristics, such as gill raker and vertebra count; hence, Liu and Li (1998b) re-described P. punctatissimus in detail based on specimens collected from Chinese coastal waters and compared its morphology with that of P. argenteus to resolve the taxonomic ambiguity of the species. In subsequent publications, the identity of the species was confirmed based on detailed osteology, sagittal otolith morphology, and integrative taxonomy (Dolganov et al, 2007;Jawad and Jig, 2017;Zhang et al, 2017;Li et al, 2019c;Yin et al, 2019). Li et al (2019c) gave counts D. V-VII 39-48, A. V-VII 32-42, P. 22-25, C. 23-26, Gr.…”

Section: Etymologymentioning

confidence: 97%

“…2-3 + 9-10 = 11-13, and vertebrae 33-35 for P. punctatissimus. Overlapping counts for vertebrae were provided by several authors: 34-37 (Dolganov et al, 2007), 34 (Jawad and Jig, 2017), and 35 (Yin et al, 2019). The available information suggests that P. punctatissimus is distributed in the western Pacific Ocean, namely, the Sea of Japan, Pacific coast of Japan, Korean Peninsula, Yellow Sea, the East China Sea, and South China Sea, and that its distribution might even extend southward toward the Indonesian Islands.…”

Section: Etymologymentioning

confidence: 99%

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Postulating the Modality of Integrative Taxonomy in Describing the Cryptic Congener Pampus griseus (Cuvier) and Systematics of the Genus Pampus (Perciformes: Stromateidae)

et al. 2021

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Pomfrets (genus Pampus), a highly commercial fishery resource distributed in the Indo-Western Pacific that includes Lessepsian migrants, have witnessed a series of systematic reforms. In this study, based on comprehensive sampling spanning type localities and coevals in the Northern Indian Ocean, the cryptic and valid species Stromateus griseus is resurrected from the synonymy and re-described as Pampus griseus (New Combination) based on 35 specimens from the Bay of Bengal, corroborated by a molecular analysis, which indicated a confined distribution of the species. The Bayesian phylogeny of the genus was reconstructed, incorporating redressed barcodes (582 nucleotides) and concatenated mitochondrial gene sequence data (1,822 nucleotides) generated from the recorded species P. candidus, P. chinensis and the neophyte along with sequences from GenBank entrusting the latest literature. The phylograms differed in topology as for seven valid species, and the one predicated on the concatenated data erected a highly supported polytomous clade for the P. cinereus complex (P. griseus, P. cinereus, and P. candidus) which shares synapomorphies. Pampus argenteus and P. minor, together, formed a sister clade to the rest. Climate-driven vicariant events during glacial epochs and the Indo-Pacific Barrier effect can be the drivers behind the Indian and Pacific Ocean sister lineages in P. chinensis. A multivariate analysis isolated the cryptic species from its congeners. This article portrays the systematics revision of genus Pampus with an integrative taxonomic approach compiling distinctive molecular, morphological, and anatomical features, revised key for species identification, taxonomic archives of Indian stromateids, and winds up with specific remarks.

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Section: Etymologymentioning

confidence: 97%

Section: Etymologymentioning

confidence: 99%

Postulating the Modality of Integrative Taxonomy in Describing the Cryptic Congener Pampus griseus (Cuvier) and Systematics of the Genus Pampus (Perciformes: Stromateidae)

et al. 2021

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“…Therefore, understanding the genetic mechanism of adaptive differentiation related to habitat heterogeneity in different populations can not only reveal the evolutionary history of species but also effectively define protection units in the context of climate change to achieve the rational management and protection of resources. Pampus echinogaster belongs to Stromateidae, Perciformes, and is widely distributed in the northwestern Pacific Ocean, including the waters of Russia, Japan, the Korean Peninsula, the Bohai Sea, the Yellow Sea, the East China Sea, and the northern South China Sea (Dolganov et al, 2007;Oh et al, 2009;Yamada et al, 2009;Nakabo, 2013;Li et al, 2019;). The complex paleogeographic dynamics of the northwestern Pacific Ocean may affect the formation of different geographical populations of marine organisms, including P. echinogaster, through events such as geographical isolation caused by glaciers and postglacial recolonization, while the hydrological conditions and environmental specificity of different habitats may further cause habitat-based adaptive differentiation of different geographical populations of marine organisms (Cheng and Sha, 2017).…”

Section: Introductionmentioning

confidence: 99%

Differentiation and Temperature Adaptation of Pampus Echinogaster Based on Genome-Wide SNPs

Lou²,

Liu³

et al. 2022

Front. Mar. Sci.

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Climate change and overfishing have led to the degradation of the quality and stock of Pampus echinogaster. Exploring the genetic structure and local adaptive evolutionary mechanisms of P. echinogaster is crucial for the management of this species. This population genomic study of nine geographical populations of P. echinogaster in China was conducted by specific-locus amplified fragment sequencing (SLAF-seq). A total of 935,215 SLAF tags were obtained, and the average sequencing depth of the SLAF tags was 20.80×. After filtering, a total of 46,187 high-consistency genome-wide single nucleotide polymorphisms (SNPs) were detected. Based on all SNPs, the population size of the nine P. echinogaster geographical populations was large. The Shantou population had the lowest genetic diversity, and the Tianjin population had the highest. Moreover, the population genetic structure based on all SNPs revealed significant gene exchange and no significant genetic differentiation among the nine P. echinogaster geographical populations, probably because of the population expansion after the last glacial period, the lack of balance between migration and genetic drift, and the long-distance diffusion of eggs and larvae. We suspect that variation of material metabolism, ion transfer, breeding, stress response, and inflammatory reactions-related genes were critical for adaptation to spatially heterogeneous temperature selection in natural P. echinogaster populations.

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“…Pampus echinogaster belongs to Stromateidae, Perciformes, and is widely distributed in the northwestern Paci c Ocean, including the waters of Russia, Japan, the Korean Peninsula, China's Bohai Sea, the Yellow Sea, the East China Sea, and the northern South China Sea [9][10][11][12][13]. The complex paleogeographic dynamics of the northwestern Paci c Ocean may affect the formation of different geographical populations of marine organisms, including P. echinogaster, through events such as geographical isolation caused by glaciers and postglacial recolonization, while the hydrological conditions and environmental speci city of different habitats may further cause habitat-based adaptive differentiation of different geographical populations of marine organisms [14].…”

Section: Introductionmentioning

confidence: 99%

The Genomic Basis of the Genetic Differentiation and Local Adaptive Evolution of Pampus Echinogaster based on SLAF-seq

Yuan

Lou

et al. 2021

Preprint

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Background: Factors such as climate change (especially ocean warming) and overfishing have led to a decline in the supply of Pampus echinogaster and a trend of decreasing age. Exploring the genetic structure and local adaptive evolutionary mechanisms is crucial for the management of P. echinogaster. Results: This population genomic study of nine geographical populations of P. echinogaster in China was conducted by specific-locus amplified fragment sequencing (SLAF-seq). A total of 935,215 SLAF tags were obtained, and the average sequencing depth of the SLAF tags was 20.80×. After filtering, a total of 46,187 high-consistency genome-wide single nucleotide polymorphisms (SNPs) were detected. Based on all SNPs, the overall genetic diversity among the nine P. echinogaster populations was high. The Shantou population had the lowest genetic diversity, and the Tianjin population had the highest. Meanwhile, the population genetic structure based on all SNPs revealed significant gene exchange and insignificant genetic differentiation between the nine P. echinogaster populations. Based on pairwise genetic differentiation (FST), we further screened 1,852 outlier SNPs that might have been affected by habitat selection and annotated SLAF tags containing these 1,852 outlier SNPs using Blast2GO. The annotation results showed that the genomic sequences at the outlier SNPs were mainly related to material metabolism, ion transport, breeding, stress response, and inflammatory reactions, which may be related to the adaptation of P. echinogaster to different environmental conditions (such as water temperature and salinity) in different sea areas.Conclusions: The high genetic similarity of nine P. echinogaster populations may have been caused by the population expansion after the last glacial period, the lack of balance between migration and genetic drift, and the long-distance diffusion of eggs and larvae. We suspected that variation of these genes associated with material metabolism, ion transfer, breeding, stress reactions, and inflammatory reactions were critical for adaptation to spatially heterogeneous temperatures in natural P. echinogaster populations.

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Species composition and distribution of butterfishes (Stromateidae) in waters of Russia

Cited by 15 publications

References 2 publications

Postulating the Modality of Integrative Taxonomy in Describing the Cryptic Congener Pampus griseus (Cuvier) and Systematics of the Genus Pampus (Perciformes: Stromateidae)

Postulating the Modality of Integrative Taxonomy in Describing the Cryptic Congener Pampus griseus (Cuvier) and Systematics of the Genus Pampus (Perciformes: Stromateidae)

Differentiation and Temperature Adaptation of Pampus Echinogaster Based on Genome-Wide SNPs

The Genomic Basis of the Genetic Differentiation and Local Adaptive Evolution of Pampus Echinogaster based on SLAF-seq

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