Tbx1, a gene involved in DiGeorge syndrome, is required for efficient incorporation of cardiac progenitors (CPs) of the second heart field (SHF) into the heart. However, the mechanisms by which TBX1 regulates this process are still unclear. Here, we have used two independent models, in vivo and in vitro, to define the role of TBX1 in establishing morphological and dynamic characteristics of target cells in the mouse. We found that loss of TBX1 impairs cell migration and adhesion in vitro and affects the axis extra cellular matrix (ECM)-integrin-focal adhesion in both models. In addition, the ECM-mediated outside-in signalling is disrupted in the absence of TBX1. Furthermore, we found that the epithelial-like layer of the SHF exhibits an apical-lateral adhesion domain containing E-cadherin, beta-catenin, paxillin, and non-muscle myosin II (NMIIB). Interestingly, loss of Tbx1 affects this adhesion domain and causes loss of polarity and alteration of focal adhesion proteins. We propose that TBX1 is required for condensation of splanchnic mesodermal cells into the epithelial-like layer of the dorsal pericardial wall. In summary, our data identifies TBX1 as an important player in SHF tissue architecture via regulation of ECM-cell and cell-cell interactions.