Spatial dependence in experiments of progeny selection for bean ( Phaseolus vulgaris L.) yield

Abstract

In field experiments, it is often assumed that errors are statistically independent, but not always this condition is met, compromising the results. An inappropriate choice of the analytical model can compromise the efficiency of breeding programs in preventing unpromising genotypes from being selected and maintained in the next selection cycles resulting in waste of time and resources. The objective of this study was to evaluate the spatial dependence of errors in experiments evaluating grain yield of bean progenies using analyses in lattice and randomized blocks. And also evaluate the efficiency of geostatistical models to describe the structure of spatial variability of errors. The data used in this study derived from experiments arranged in the lattice design and analyzed as lattice or as randomized blocks. The Durbin-Watson test was used to verify the existence of spatial autocorrelation. The theoretical semivariogram was fitted using geostatistical models (exponential, spherical and Gaussian) to describe the spatial variability of errors. The likelihood ratio test was applied to assess the significance of the geostatistical model parameters. Of the eight experiments evaluated, five had moderate spatial dependence for the randomized blocks analysis and one for both analyses, in lattice and randomized blocks. The area of the experiments was not a determinant factor of the spatial dependence. The spherical, exponential and Gaussian geostatistical models with nugget effect were suitable to represent the spatial structure in the randomized block analysis. The analysis in lattice was efficient to ensure the independence of errors.

Productivity of Dry Grains of Cowpea [Vigna unguiculata (L.)] Creole Cultivar (Canupum), as a Function of Different Planting Densities

“…This characteristic is important because it highlights the greater grain production after threshing the pods. [14], the number of pods plant -1 is the basic component that most relates to the grain productivity, being greatly influenced by the environment. [15], higher densities of cowpea plants result in an excessive number of plants in the line, with less availability of photoassimilates for their development.…”

Spatial variability in evaluation experiments of corn genotypes in the state of Mato Grosso do Sul, Brazil

“…Other authors in literature have used spatial statistical analysis involving first-order autoregressive models which are separable in two dimensions (Resende & Sturion, 2003;Maia, Siqueira, Carvalho, Peternelli, & Latado, 2013), geostatistical models (Campos et al, 2016;Silva et al, 2016), Papadakis methods, and moving averages (Candido, Perecin, Landell, & Pavan, 2009). However, ANOVA-AR is yet to be used.…”

“…The presence of adjacent plots under spatial autocorrelation may influence the accurate selection and genetic gains of genotypes, thereby promoting the success or failure of a genetic breeding program (Bernadeli et al, 2021). Therefore, spatial statistical tools should be used to select genotypes for their real performance as verified by Duarte and Vencovsky (2005) and Bernadeli et al (2021) in soybean genotypes, and by Silva et al (2016) in their assessment of the efficiency of spatial methods in evaluating the yield of common bean families.…”

Heterogeneity Assessment of Kenaf Breeding Field through Spatial Dependence Analysis on Crop Growth Status Map Derived by Unmanned Aerial Vehicle

“…In order to neutralize the adverse effects from the field heterogeneity, breeders design their programs with repetition of targeted genotypes and the randomization of plot placement. However, a random design of replication for each subdivided genotype plot requires a large area and high management costs [18,19]. Moreover, the promising parental candidate is determined over several years, requiring multiple years in the same field with a recurrent phenotypic selection strategy [20].…”

“…In fact, the characteristics in one position have a degree of correlation to characteristics in neighboring positions through some hidden factors. The tendency for characteristics in one area being attributed to those of the other, nearby areas is called spatial dependence [19]. Spatial dependence analysis presents objective statistics about the relationships between the growth status in a specific crop and the growth status of surrounding crops.…”