The US Army Corps of Engineers recently dredged and permanently reopened Packery Channel, historically a natural tidal inlet, to allow water exchange between the Gulf of Mexico and the Laguna Madre, TX, USA. The main objective of this study was to characterize estuarine-dependent recruitment and community structure in seagrass habitats adjacent to Packery Channel pre-and post-channel opening. We sampled fish and crustacean abundance using an epibenthic sled in Halodule wrightii seagrass meadows in both control and impact locations over 2 years, 1 year before the opening of Packery Channel ). Using the before-after control-impact design, we found significantly fewer nekton post-channel opening. However, we found significantly higher mean densities of newly settled estuarine-dependent species (Sciaenops ocellatus, Micropogonias undulatus, Lagodon rhomboides, Callinectes sapidus, and penaeid shrimp) post-opening. Multivariate analyses showed significant community assemblage changes post-opening with increased contribution of estuarine-dependent species post-opening. Our results show that estuarine-dependent nekton are using Packery Channel as a means of ingress into areas of the upper Laguna Madre's seagrass meadows that were previously inaccessible, which may lead to higher fisheries productivity for some of these economically and ecologically important fishery species.