Previous analyses of the distribution of heat shock (hs) proteins in soybean (Glycine max L. Merr., var Wayne) have demonstrated that a fraction of the low molecular weight hs protein associates with ribosomes during hs. To more specificafy characterize the nature of this association, isokinetic centrifuption of ribosomes through sucrose gradients was used to separate monosomes from polysomes. The present analysis demonstrated that hs proteins were bound to polysomes but not monosomes. Treatment of polysomes with puromycin, K+, and Mg2+, which caused dissociation of ribosomes into 40S and 60S subunits, also caused dissociation of the hs proteins. Using the procedure of Nover et al. (1983, Mol. Ceil Biol, 3: 1628Biol, 3: -1655 In tomato and a number of other plant species, hs proteins were found in the form of cytoplasmic aggregates termed hs granules (18,20). These granules were distinct from ribosomes based on several characteristics. First, they were found in two size classes: 30 to 40 nm and 70 to 80 nm. Second, they contained approximately half of the low mol wt hs proteins present in the cytoplasm. Third, they contained a number of minor proteins apparently unrelated to ribosomal proteins. Formation of these granules was temperature-dependent, implying that they have a protective function. If hs protein synthesis was preinduced, hs granules formed when tomato cells were given a supraoptimal hs; but disaggregation during recovery was much slower than in cells receiving a normal hs.Comparison of the isolation procedures for ribosomes (15) and hs granules (20) suggested that there is a possibility for the contamination of ribosome preparations with hs granules. The major difference between the two procedures is that, prior to the isolation of hs granules, the ribosomes are dissociated by KCI/EDTA treatment. It was reported that hs proteins associated minimally with intact ribosomes and not at all with ribosomal subunits (20). Because the association of hs proteins with ribosomes of soybean (15) has not been rigorously characterized, it is possible that hs proteins are bound in a granule-like structure. To examine this question, the association of hs proteins with ribosomes has been analyzed by isokinetic and isopycnic centrifugation. A hs granule fraction has also been isolated and characterized. The results indicate that hs proteins are bound to polysomes rather than monosomes and that the polysome-bound and granule-bound hs proteins represent two distinct populations in the cytoplasm.One approach to determining the function of hs3 proteins has been to compare their localization patterns in cells during hs and recovery. Specific associations of hs proteins have been reported for nuclei (15,22, 23), nucleoli (22, 23), chloroplasts (10, 24), mitochondria (15,22), the plasma membrane (14,22), and elements of the cytoskeleton (12,22). In tomato (20) and soybean (15), a fraction of the hs proteins was also found bound to ribosomes in a temperature-dependent interaction. Most of these proteins were repr...