2022
DOI: 10.1016/j.ajpath.2022.06.006
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Single-Cell RNA-Seq Reveals Heterogeneity of Cell Communications between Schwann Cells and Fibroblasts within Vestibular Schwannoma Microenvironment

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Cited by 12 publications
(13 citation statements)
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“…We next constructed the linear single‐cell trajectories of gene expression changes using the Monocle package (Trapnell et al, 2014), as previously reported (Xu et al, 2022). Monocle clustering identified 5 cellular clusters, consistent with Seurat clustering (Figure 3f).…”
Section: Resultsmentioning
confidence: 99%
See 1 more Smart Citation
“…We next constructed the linear single‐cell trajectories of gene expression changes using the Monocle package (Trapnell et al, 2014), as previously reported (Xu et al, 2022). Monocle clustering identified 5 cellular clusters, consistent with Seurat clustering (Figure 3f).…”
Section: Resultsmentioning
confidence: 99%
“…To identify distinct trajectories among different cell clusters, we used Monocle 3 R package (RRID:SCR_018685) (Trapnell et al, 2014), as previously reported (Xu et al, 2022). The preprocessed scRNA-seq data obtained from Seurat were converted to a cell_data_set object using SeuratWrappers package (RRID:SCR_022555).…”
Section: Trajectory Analysismentioning
confidence: 99%
“…The concept that Schwannomas arise as a consequence of injurious stimuli to peripheral nerves is evidenced by recent single-cell transcriptomic and epigenetic studies where nerve injury-like states were discovered, and characterised by myeloid cell infiltration 49,50 . Our analyses further support this finding, whereby we illustrate that alternatively-activated TAMs significantly interact with PanCK+ SOX-10+ Schwann cells in both Antoni A and B regions; cell populations expressing both PanCK and vimentin (which is present on all Schwann cell populations we identified) are associated with wound healing responses 51 , which mirror the function of alternatively-activated TAMs.…”
Section: Discussionmentioning
confidence: 99%
“…However, this genetic predisposition alone does not entirely account for tumor biology, as not all VS tumors harbor NF2 mutations. Based on single-cell ribonucleic acid (RNA) sequencing, differential expression of merlin -regulated genes may also result in differential pathogenicity of NF2 mutations [ 33 ]. Genes unrelated to NF2 such as HGF/c-MET; noncoding genomes (such as microRNAs and epigenetic mechanisms) have also been implicated in sporadic VS.…”
Section: Discussionmentioning
confidence: 99%