“…The MBN Explorer program 2 [26,28,29] is an advanced software package for complex biomolecular, nano-and mesoscopic system simulations. It is suitable for classical molecular dynamics, Monte Carlo [30][31][32][33][34] and relativistic dynamics simulations [35][36][37][38] of a large range of molecular systems, such as nano- [39,40] and biological systems, nanostructured materials [41,42], composite/hybrid materials [43][44][45][46], gases, liquids, solids and various interfaces [47,48], with sizes ranging from atomic to mesoscopic. Among applications of MBN Explorer are also the simulations of thermo-mechanical damage in biological systems, e.g.…”