Abstract:This paper presents a simulation framework in which a pre-assembled rectangular pattern of DNA tiles can be put together with sets of other DNA tiles to autonomously assemble replicas of itself in a discrete two-dimensional grid.The simulator implements both abstract and chemical kinetics based modelling to simulate the tile pattern self-replication. While the abstract model uses only logical matching between the edges of tiles to guide the assembly process, the chemical kinetics model calculates stochastic pr… Show more
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