Abstract:Cytologic screening has been widely used for detecting the cervical cancers. In this study, a semiautomatic PC-based cellular image analysis system was developed for segmenting nuclear and cytoplasmic contours and for computing morphometric and textual features to train support vector machine (SVM) classifiers to classify four different types of cells and to discriminate dysplastic from normal cells. A software program incorporating function, including image reviewing and standardized denomination of file name… Show more
“…So, several attempts have been made to make these assessments more objective by using PC based morphometry. [15], [16], [17], [18] In the present study we have utilised ImageJ and three of its plugins to develop a simple macro to analyse nuclear parameters in normal and abnormal pap smears. In order to achieve this, we had to enhance the point of interest while removing the noise and suppressing the distracting background details.…”
BACKGROUND AND PURPOSE: Carcinoma of cervix is the fourth commonest malignancy in women. Its incidence is progressively falling due to the routine use of Pap smears to detect precancerous lesions. However, routine Pap smear examination is time consuming and, as it is based on descriptive morphological assessment, false positive or negative reports are likely to occur. Using morphometric techniques, several attempts have been made to improve the accuracy of reports. In the present study, we have used Image morphometric software and some of its plugins to create a macro to analyse large number of cells at a time. MATERIALS AND METHODS: Using Image and three of its plugins, namely, BEEPS, Kuwahara filter and Mexican Hat filter, we created a macro to morphometrically analyse normal, reactive and neoplastic Pap smears. We also compared the macro measurements with manual measurements. RESULTS AND CONCLUSIONS: Results obtained with macro showed strong positive correlation with manual measurement. Although the neoplastic nuclei were on an average larger than reactive/normal nuclei, there was considerable overlap. More than the enlargement, anisonucleosis (variability in the size) appeared to be a better indicator of neoplasia. The macro that we developed works rapidly and gives results comparable to manual measurements provided the smears and the photographs are technically acceptable.
“…So, several attempts have been made to make these assessments more objective by using PC based morphometry. [15], [16], [17], [18] In the present study we have utilised ImageJ and three of its plugins to develop a simple macro to analyse nuclear parameters in normal and abnormal pap smears. In order to achieve this, we had to enhance the point of interest while removing the noise and suppressing the distracting background details.…”
BACKGROUND AND PURPOSE: Carcinoma of cervix is the fourth commonest malignancy in women. Its incidence is progressively falling due to the routine use of Pap smears to detect precancerous lesions. However, routine Pap smear examination is time consuming and, as it is based on descriptive morphological assessment, false positive or negative reports are likely to occur. Using morphometric techniques, several attempts have been made to improve the accuracy of reports. In the present study, we have used Image morphometric software and some of its plugins to create a macro to analyse large number of cells at a time. MATERIALS AND METHODS: Using Image and three of its plugins, namely, BEEPS, Kuwahara filter and Mexican Hat filter, we created a macro to morphometrically analyse normal, reactive and neoplastic Pap smears. We also compared the macro measurements with manual measurements. RESULTS AND CONCLUSIONS: Results obtained with macro showed strong positive correlation with manual measurement. Although the neoplastic nuclei were on an average larger than reactive/normal nuclei, there was considerable overlap. More than the enlargement, anisonucleosis (variability in the size) appeared to be a better indicator of neoplasia. The macro that we developed works rapidly and gives results comparable to manual measurements provided the smears and the photographs are technically acceptable.
“…Specifically, the algorithm can be summarized in four steps: 1) construct the graph and calculate the edge weight with an intensity similarity-based weighting function, 2) obtain seeded nodes with K labels, 3) compute the probability of each label in every node by solving a combinatorial Dirichlet problem, and 4) assign each node the label associated with the largest probability to obtain image segmentation. The random walk algorithm is applied to joint segmentation of nuclei and cytoplasm of Pap smear cells in [290], which consists of three major stages: 1) extract object edges with Sobel operator, 2) enhance the edges with a maximum gray-level gradient difference method, and 3) refine edges with random walk, which can separate overlapping objects. A fast random walker algorithm is presented in [291] for interactive blood smear cell segmentation, which improves the running time using offline precomputing.…”
Section: Nucleus and Cell Segmentation Methodsmentioning
Digital pathology and microscopy image analysis is widely used for comprehensive studies of cell morphology or tissue structure. Manual assessment is labor intensive and prone to inter-observer variations. Computer-aided methods, which can significantly improve the objectivity and reproducibility, have attracted a great deal of interest in recent literatures. Among the pipeline of building a computer-aided diagnosis system, nucleus or cell detection and segmentation play a very important role to describe the molecular morphological information. In the past few decades, many efforts have been devoted to automated nucleus/cell detection and segmentation. In this review, we provide a comprehensive summary of the recent state-of-the-art nucleus/cell segmentation approaches on different types of microscopy images including bright-field, phase-contrast, differential interference contrast (DIC), fluorescence, and electron microscopies. In addition, we discuss the challenges for the current methods and the potential future work of nucleus/cell detection and segmentation.
“…We compare RFD with other 13 different feature sets, based on previously published work [6,7,8,9,10,11,12,13,14,15,16,17,18]; among them, 7 feature sets were designed specifically for cell classification [6,7,8,9,10,11,12].…”
This paper introduces computational tools for cell classification into normal and abnormal, as well as content-based-image-retrieval (CBIR) for cell recommendation. It also proposes the radial feature descriptors (RFD), which define evenly interspaced segments around the nucleus, and proportional to the convexity of the nuclear boundary. Experiments consider Herlev and CRIC image databases as input to classification via Random Forest and bootstrap; we compare 14 different feature sets by means of False Negative Rate (FNR) and Kappa (κ), obtaining FNR= 0.02 and κ = 0.89 for Herlev, and FNR= 0.14 and κ = 0.78 for CRIC. Next, we sort and rank cell images using convolutional neural networks and evaluate performance with the Mean Average Precision (MAP), achieving MAP= 0.84 and MAP= 0.82 for Herlev and CRIC, respectively. Cell classification show encouraging results regarding RFD, including its sensitivity to intensity variation around the nuclear membrane as it bypasses cytoplasm segmentation.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.