“…Requests for raw sequencing data and metadata were made to the corresponding and first authors of the remaining 16 studies, resulting in the provision of these data for a further five studies. This resulted in 39 studies with datasets that were available for inclusion: 31 that characterized only the 16S rRNA gene [25, 27, 28, 30-33, 35, 38, 52, 53, 55-59, 61, 62, 64-66, 68, 69, 71-76, 78, 79], two that characterized only the 18S rRNA gene [34,80], two that characterized the 16S and ITS2 rRNA genes [82,83], two that used shotgun metagenomics [84,85], one that characterized the 16S and 18S rRNA genes [26], and one that used shotgun metagenomics and characterized the 16S rRNA gene [86] (Supplementary Table S1B). Relatively few studies focussed on the 18S and ITS2 rRNA genes and these used primers that targeted different regions and were from different environments.…”