Abstract:Problem Endometrium, the innermost mucosal layer of the uterus, serves as a lodge for the embryo in eutherian mammals. The endometrium is constituted of various cell types, and each cell type executes specific functions to facilitate embryo implantation and development. It is well established that the endometrium, despite being non-permissive to the embryo for the major period of a menstrual cycle, is irreplaceable in the scheme of events essential for procreation. However, the embryo, before initiating physic… Show more
“…Additionally, cytokines, chemokines, proteases, antiproteases, growth factors present in the endometrial fluids or secretions have also been found to be important for the maintenance of microenvironment during implantation which helps in endometrium-embryo crosstalk. 30,32 Similarly, in our study, the genes involved in downregulation of immune and inflammatory response-related functions ( 1,8,23 Their downregulation in our study indicates similar results even in COS. 37 In the current study, lower expression of LIF and IL6ST in glandular epithelium and stromal cells was observed in cases compared to controls even on protein level by immunohistochemistry, indicating the significance of these genes in endometrial receptivity, and therefore validates the results by microarray and real time.…”
Section: Downregulated Genes In Immune Response Downregulated Genes Isupporting
Importance of immune and inflammatory response in endometrial receptivity adds on to the current knowledge of gene expression profile in IF under COS. The panel of genes involved in these pathways would be useful in determining further line of treatment for IF during IVF.
“…Additionally, cytokines, chemokines, proteases, antiproteases, growth factors present in the endometrial fluids or secretions have also been found to be important for the maintenance of microenvironment during implantation which helps in endometrium-embryo crosstalk. 30,32 Similarly, in our study, the genes involved in downregulation of immune and inflammatory response-related functions ( 1,8,23 Their downregulation in our study indicates similar results even in COS. 37 In the current study, lower expression of LIF and IL6ST in glandular epithelium and stromal cells was observed in cases compared to controls even on protein level by immunohistochemistry, indicating the significance of these genes in endometrial receptivity, and therefore validates the results by microarray and real time.…”
Section: Downregulated Genes In Immune Response Downregulated Genes Isupporting
Importance of immune and inflammatory response in endometrial receptivity adds on to the current knowledge of gene expression profile in IF under COS. The panel of genes involved in these pathways would be useful in determining further line of treatment for IF during IVF.
“…Furthermore, we detected the down-regulation in IF patients of genes involved in cell cycle and apoptosis regulation ( Supplementary Table 3 ), indicative of a reduced rate of cell proliferation in endometrium. Additionally, in this meta-analysis, the down-regulation genes in IF patients were also enriched in estradiol response, chemokines, growth factors, which have been found to be important for the maintenance of microenvironment during implantation supporting the endometrium-embryo crosstalk [ 34 , 35 ].…”
Section: Discussionmentioning
confidence: 99%
“…We used a comprehensive high-quality PPI database downloaded from the InnateDB [ 30 ], which participates in the International Molecular Exchange (IMEx) consortium [ 31 ]. The database was derived by manually curating protein interaction data from published literature and by integrating experimental data from several PPI databases including MINT [ 32 ], IntAct [ 33 ], BIND, BioGRID [ 34 ] and DIP [ 35 ]. The gene networks were visualized using Cytoscape 3.2.0 [ 36 ].…”
Genetic factors in endometrium are likely to be involved in the embryo implantation failure (IF), one of the major limiting factors in the success of in vitro fertilization (IVF). In this study, we aimed to identify critical genes from the transcriptional profile for the establishment of the endometrial receptivity which supporting the normal pregnancy. Three GEO datasets, including 12 samples of IF and 12 samples of controls, were used for the meta-analysis. We identified 182 different expression genes (DEGs) by comparing IF with controls and present here the successful clustering according to sample type, not by the origin. The gene ontology (GO) enriched analysis demonstrated the significant downregulation in activation and regulation of inflammatory and immune response in IF patients. Furthermore, network analysis of down-regulated genes identified the significant hub genes containing GADD45A (growth arrest and DNA damage inducible alpha, Degree = 77), GZMB (granzyme B, Degree = 38) and NLRP2 (NLR family pyrin domain containing 2, Degree = 37). The lower expression of NLRP2, related to inflammatory responses with the most degree in the network, was validatied by other GEO data. Besides, it was confirmed that the NLRP2 could act as a predictor for pregnancy after IVF (AUC = 87.93%; sensitivity, 60.00%; specificity, 91.30% ). Our meta-analysis will help us to better understand the molecular regulation of endometrial receptivity, and guiding further line of treatment for IF during IVF.
“…Endometrial alterations in clinical practice are characterized by the endometrial thickness and morphological alterations which require further histological [6] and biochemical investigations [7].…”
Persistent supraphysiological serum estradiol (E2) levels during controlled ovarian hyper-stimulation (COH) have a detrimental effect on endometrial receptivity. In this study, we explored RNA expression and DNA methylation profiles from patients’ endometrium. The patients were divided into two groups: the COH cycle (n=3, hCG+7) group and normal cycle group (n=3, LH+5). Quantitative RT-PCR was used to validate the expression of selected differentially expressed genes (DEGs). Comparing natural and stimulated endometrium transcriptome profiles revealed 640 DEGs, with a > 2-fold change (FC) and p < 0.01. The DEGs were reported to be involved in endometrial receptivity and epithelial-mesenchymal transition (EMT). The expression of IGFBP-1, MMP9, FGF9, LIF, WNT4, HAND2, and immune system-related genes were significantly up-regulated. By clustering and KEGG pathway analysis, molecules and pathways associated with endometrial receptivity (PI3K-Akt signaling pathway) were identified. DNA methylation was partially correlated to gene expression. In conclusion, RNA-seq COH affected endometrial receptivity and EMT/MET process by accelerated the decidualization process and broken the balance of estrogen and progesterone receptors expression. However, this was not associated with changes in DNA methylation.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.