Fast atomlion bombardment mass spectrometry was used to investigate the structures of protonated molecules of macrocyclic nitrogen-containing crown ethers with two polyoxyethylene chains linked by two thiourea groups. The collision-induced dissociation (CID) of their MH+ ions, using the mass analysed ion kinetic energy (MIKE) spectrometry method reveals four clearly defined competitive fragmentations. The product-ion intensities clearly show that, in the MH' ions of asymmetric crown ethers, the proton is preferentially located in the region of the longer polyoxyethylene chain. The characteristics of CID MIKE spectra of isomeric crown ethers are discussed.The structural elucidation of several crown ethers by study of their normal (electron ionization, EI) mass spectra, unimolecular and collision-induced dissociation (CID) mass-analysed ion kinetic energy (MIKE) spectra has been initiated by a few research groups.'-" Already in the early stage of study of these compounds and their naturally occurring analogues, i.e. cyclic depsipeptides, it has become clear that their unique properties depend not only on the number and properties of the groups directly interacting with the bonded particle, but also to a large extent on the spatial structure of the entire molecule.I2 Nonbonded and hydrogen-bonded intramolecular interactions in these molecules control their preferential secondary structures. It has been shown,I3 for example, that the selective affinity of 18-Crown-6 towards potassium ions is also caused by conformational reorganization of this macrocyclic molecule during complex formation in which the organic ligand changes its initial ellipsoidal shape to a circle in the complex. The ellipsoidal shape of the free macrocycle makes allowance for the weak 1 3 and 1,8 C-H--~ 0 intramolecular interactions that have been studied in the crystal stateI4 and in s~l u t i o n . '~ In the gas phase it has been shown that hydrogen-atom migration during these interactions in molecular ions of crown ethers of 3n-Crown-n type initiate cleavage of the macrocyclic ring and control the formation of the most intense peaks in the EI mass ~p e c t r a .~ This specific hydrogen migration reflects the features of the gasphase spatial structure of the macroheterocyclic molecule, and determines the principal difference between the fragmentation paths of 1,6dioxane and macrocyclic oligoethers. Evidence about shared or movable hydrogen atoms inside the crown ether cavity can also be obtained from a study of the gas-phase ion/molecule reactions of organometallic ions with crown ether^.^ The formation of the most intense fragment ions in the EI mass spectra of crown ethers is controlled by specific hydrogen migration and also by the common fragmentation pattern of the molecular-radical ion, M", where the leaving neutral could be either a molecule or a radical. The leaving groups from MH' ions formed by the fast-atom bombardment (FAB) ionization process,I6 following collision-induced fragmentation," are exclusively neutral molecules. This simpli...