CBK model composition using paired web services and executable functions: A demonstration for individualizing preventive services

Abstract

Introduction Learning health systems are challenged to combine computable biomedical knowledge (CBK) models. Using common technical capabilities of the World Wide Web (WWW), digital objects called Knowledge Objects, and a new pattern of activating CBK models brought forth here, we aim to show that it is possible to compose CBK models in more highly standardized and potentially easier, more useful ways. Methods Using previously specified compound digital objects called Knowledge Objects, CBK models are packaged with metadata, API descriptions, and runtime requirements. Using open‐source runtimes and a tool we developed called the KGrid Activator, CBK models can be instantiated inside runtimes and made accessible via RESTful APIs by the KGrid Activator. The KGrid Activator then serves as a gateway and provides a means to interconnect CBK model outputs and inputs, thereby establishing a CBK model composition method. Results To demonstrate our model composition method, we developed a complex composite CBK model from 42 CBK submodels. The resulting model called CM‐IPP is used to compute life‐gain estimates for individuals based their personal characteristics. Our result is an externalized, highly modularized CM‐IPP implementation that can be distributed and made runnable in any common server environment. Discussion CBK model composition using compound digital objects and the distributed computing technologies is feasible. Our method of model composition might be usefully extended to bring about large ecosystems of distinct CBK models that can be fitted and re‐fitted in various ways to form new composites. Remaining challenges related to the design of composite models include identifying appropriate model boundaries and organizing submodels to separate computational concerns while optimizing reuse potential. Conclusion Learning health systems need methods for combining CBK models from a variety of sources to create more complex and useful composite models. It is feasible to leverage Knowledge Objects and common API methods in combination to compose CBK models into complex composite models.

Personalized Disease Prevention (PDP): study protocol for a cluster-randomized clinical trial

“…This decision necessitates a provider-, rather than patient-facing tool in prior work [51], because EHR patient portals (which are accessed externallyoutside a firewall) have less advanced capabilities than a clinician-facing EHR. We will do so in a generally scalable approach, which should facilitate eventual dissemination to other health systems, particularly those utilizing Epic TM 's EHR [52].…”