We fabricated Si micro-cavities with Ge dots and successfully observed electroluminescence at room temperature. In the case of micro-disks, we observed both modes of whispering gallery modes and Fabry-Perot modes in photoluminescence, but the latter was found to be well eliminated from micro-rings. For photonic crystals, we observed systematic dependence of PL peaks on the structure parameters such as the diameter and period of air holes and crystal pattern. More than one thousand of Q-factor was observed in these photonic crystals. Well resolved electroluminescence peaks were observed both for micro-disks and photonic crystals at room temperature. However, the line width was found to be much broader than that of PL samples, probably due to the additional metal electrodes, oxide films and doping regions which are not included in PL samples. Moreover, the peak shift to higher energies coming from thermal treatment for diode fabrication was observed.