Several authors have noted that there is more variability in the response to a given stimulus within the respiratory system if that stimulus is applied on different days than if repeated applications are performed on the same day (Scott, 1915;Sahn et al. 1977;Zhang & Robbins, 2000). However, few have documented any corresponding variations in end-tidal P CO 2 (P ET,CO 2 ) or arterial P CO 2 (P a,CO 2 ) within subjects and between days, although Shea (1997) commented that P ET,CO 2 within an individual remains within a range of ~4 mmHg. The first purpose of this study was to determine whether there was a between-day variability within subjects of this order of magnitude.If such variability in P ET,CO 2 and P a,CO 2 is present, what underlies such variability? There are of course many possible mechanisms. However, one class of such mechanisms requires that the variations in P ET,CO 2 are driven through variations in metabolic acid-base status. If so, one would predict that there would be a relatively tight correlation between measures of the metabolic acid-base state of the blood (e.g. standard bicarbonate and standard base excess) and the values for P ET,CO 2 /P a,CO 2 . Alternatively, there are many other possible mechanisms that do not drive variations in P ET,CO 2 /P a,CO 2 through variations in metabolic acid-base status of the blood. These include variations in metabolic rate and variations in the respiratory controller, an example of which would be variations in a wakefulness drive to breathe (Shea, 1996). In these cases a looser relationship would be expected between the measures of metabolic acid-base status and P ET,CO 2 /P a,CO 2 . The second purpose of this study was to determine whether between-day variability in P CO 2 within subjects is driven through variations in metabolic acid-base status.In addition to variability that can be observed within subjects, there is also considerable variability between subjects. Again, this variability may arise in many different ways. The aims of this study were: (1) to determine the within-subject, between-day variability in end-tidal P CO 2 (P ET,CO 2 ); (2) to determine whether the within-subject, between-day variability in P ET,CO 2 was caused by variations in metabolic acid-base status; and (3) to determine whether between-subject variations in blood gas variables arose predominantly through variations in respiratory or renal pH control mechanisms. Fourteen healthy males were studied, of whom 12 provided adequate data for further analysis. Each subject was studied on at least six different occasions, with each visit separated by at least 1 week. On each occasion, P ET,CO 2 was determined over a 4-10 min period using a fine nasal catheter taped just inside the nose, and an arterialised capillary blood sample was obtained from each ear and analysed for blood gases. The following results were obtained. (1) P ET,CO 2 showed a standard deviation (S.D.) for the within-subject, between-day variation of 1.06 mmHg. (2) Less than 5 % (P = NS) of the variability in P ET,C...