Abstract:The majority of cell differentiation associated tumor markers reported to date are either glycoproteins or glycolipids. Despite there being a large number of glycoproteins reported as candidate markers for various cancers, only a handful are approved by the US Food and Drug Administration. Lectins, which bind to the glycan part of the glycoproteins, can be exploited to identify aberrant glycosylation patterns, which in turn would help in enhancing the specificity of cancer diagnosis. Although conventional tech… Show more
“…87 Coupled with mass spectrometry via in-situ proteolysis, it provides more specific determination of proteins. 88 Lectin magnetic beads present an alternative form of the spatial arrays.…”
Section: Sample Preparation and Methods To Partition The Glycoproteomementioning
“…87 Coupled with mass spectrometry via in-situ proteolysis, it provides more specific determination of proteins. 88 Lectin magnetic beads present an alternative form of the spatial arrays.…”
Section: Sample Preparation and Methods To Partition The Glycoproteomementioning
“…Abnormal glycosylation had demonstrated correlation with occurrence and development of diseases [10, 11]. Lectin microarray is a powerful technology that uses a panel of lectins immobilized on solid phase substrate for high-throughput analysis of glycans and glycoproteins related to diseases such as cancer and inflammatory diseases [12–14]. Alterations of sialylated MUC1 glycosylation detected by lectin microarray could be indispensable for the development of cholangiocarcinoma [15].…”
Diabetic nephropathy is a major cause of chronic kidney disease and end-stage kidney disease. However, so little is known about alterations of the glycopatterns in urine with the development of diabetic nephropathy. Presently, we interrogated glycopatterns in urine specimens using a lectin microarray. The results showed that expression levels of Siaα2-6Gal/GalNAc recognized by SNA exhibited significantly increased tendency with the development of diabetic nephropathy; moreover, SNA blotting indicated glycoproteins (90 kDa, 70 kDa, and 40 kDa) in urine may contribute to this alteration. Furthermore, the glycopatterns of (GlcNAc)2–4 recognized by STL exhibited difference between diabetic and nondiabetic nephropathy. The results of urinary protein microarray fabricated by another 48 urine specimens also indicated (GlcNAc)2–4 is a potential indictor to differentiate the patients with diabetic nephropathy from nondiabetic nephropathy. Furtherly, STL blotting showed that the 50 kDa glycoproteins were correlated with this alteration. In conclusion, our data provide pivotal information to monitor the development of diabetic nephropathy and distinguish between diabetic nephropathy and nondiabetic renal disease based on precise alterations of glycopatterns in urinary proteins, but further studies are needed in this regard.
“…Such features make lectin microarrays suitable for the initial detection of glycome differences in biological samples, although it yields less detailed structural information. Currently, lectin microarray has proven useful in assessing the characteristics of tumors and for screening novel biomarkers for cancer diagnosis33. Based on highly sensitive evanescent-field fluorescence-assisted lectin microarray34, we have established a feasible method for differential glycan profiling targeting very small regions (i.e., “one-dot” sections comprising about 1000 cells) on FFPE tissue sections after delipidation3536, and identified Wisteria floribunda agglutinin (WFA) as the most reliable lectin probe to detect cholangiocarcinoma-specific glyco-alterations37.…”
The significance of glycomic profiling has been highlighted by recent findings that structural changes of glycans are observed in many diseases, including cancer. Therefore, glycomic profiling of the whole body (glycome mapping) under different physiopathological states may contribute to the discovery of reliable biomarkers with disease-specific alterations. To achieve this, standardization of high-throughput and in-depth analysis of tissue glycome mapping is needed. However, this is a great challenge due to the lack of analytical methodology for glycans on small amounts of endogenous glycoproteins. Here, we established a standardized method of lectin-assisted tissue glycome mapping. Formalin-fixed, paraffin-embedded tissue sections were prepared from brain, liver, kidney, spleen, and testis of two C57BL/6J mice. In total, 190 size-adjusted fragments with different morphology were serially collected from each tissue by laser microdissection and subjected to lectin microarray analysis. The results and subsequent histochemical analysis with selected lectins were highly consistent with previous reports of mass spectrometry-based N- and/or O-glycome analyses and histochemistry. This is the first report to look at both N- and O-glycome profiles of various regions within tissue sections of five different organs. This simple and reproducible mapping approach is also applicable to various disease model mice to facilitate disease-related biomarker discovery.
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