c Shotgun proteomics using liquid chromatography-tandem mass spectrometry (LC-MS/MS) was applied to detect -lactamases in clinical Acinetobacter baumannii isolates. The correlation of the detection of -lactamase proteins (rather than PCR detection of the corresponding genes) with the resistance phenotypes demonstrated an added value for LC-MS/MS in antimicrobial susceptibility testing.
Rapid detection and identification of -lactamase-related resistance are complicated by the increasing variety of -lactamases (with differences in substrate specificity), as well as the lack of information on the expression of particular -lactamases for DNA-based detection. Recently, methods based on mass spectrometry, either to identify resistance-conferring proteins (1, 2) or to assay their activity (3, 4), have been developed. In this study, liquid chromatographytandem mass spectrometry (LC-MS/MS) was employed to detect and to identify oxacillinases and other -lactamases in clinical isolates of the nosocomial pathogen Acinetobacter baumannii, in order to evaluate its potential as a rapid and generic method for the detection of -lactamase-related resistance. Emerging multidrug resistance in A. baumannii, resulting from innate resistance to multiple classes of antimicrobials along with a large capacity for acquiring resistance, is an increasing concern in hospitals; the recent rapid development and spread of resistance against carbapenems are of particular concern (5, 6). Resistance is usually caused by the activity of intrinsic or acquired carbapenem-hydrolyzing class D -lactamases, also known as oxacillinases. Although oxacillinases are considered weak carbapenem hydrolyzers, strains become resistant when the genes are strongly expressed (7). Similarly, A. baumannii resistance against ceftazidime resulting from overexpression of Acinetobacter-derived cephalosporinase (ADC), a chromosomally encoded, AmpC-type -lactamase in A. baumannii, has been reported (8). Elevated expression of -lactamase genes in A. baumannii is often associated with the presence of an insertion element (IS) (in particular, ISAba1) upstream of the -lactamase gene, providing strong promoter elements (9). The LC-MS/MS results in this study were compared with the results of susceptibility tests, PCR tests for the presence of different -lactamase genes and insertion elements, and sequencing of detected -lactamase genes.A total of 29 A. baumannii isolates from blood and wound infections, collected at the San Antonio Military Medical Center (San Antonio, TX) between 2006 and 2008, were studied. Pulsedfield gel electrophoresis (PFGE) analysis revealed that these clustered into 15 different PFGE types, with a maximum of 5 isolates belonging to a PFGE type (see Fig. S1 in the supplemental material) (10, 11). Resistance to the carbapenems imipenem and meropenem and the third-generation cephalosporin ceftazidime was determined by broth microdilution testing (12) ( Table 1). Fifteen isolates were resistant to both carbapenems, 11 were susceptible, and three...