“…These dynamic systems present numerous challenges for scientific research, monitoring, management, societal valuation and setting of policy goals. Papers in this Special Issue embrace these challenges with vigour and innovation through consideration of patterns of biodiversity and ecohydrology (Balcombe et al, 2014;Leitão et al, 2014;Novais et al, in press;Pires et al, 2014), impacts of impoundment, flow regulation and agricultural intensification (Godinho et al, 2014;Matono et al, 2014), community composition and biotic interactions involving alien species (Bueno-Enciso et al, 2014;Magoulick, 2014), ecological condition (health) assessment (Prat et al, 2014) and the concept and practice of reconciliation ecology (Moyle, 2014) as a way of managing novel ecosystems for their values and desirable ecological services to society, rather than trying to restore an unachievable original ecological state.…”