Abstract:The relative role of retinal isomerization and microscopic polarization in the phototransduction process of bacteriorhodopsin is still an open question. It is known that both processes occur on an ultrafast time scale. The retinal trans3cis photoisomerization takes place on the time scale of a few hundred femtoseconds. On the other hand, it has been proposed that the primary lightinduced event is a sudden polarization of the retinal environment, although there is no direct experimental evidence for femtosecond… Show more
“…2 Inset. This range, the upper limit of which was determined by the time resolution of our experimental setup, fills an important part of the gap between the frequency regions accessible by electronic measuring techniques (5-7) and coherent infrared emission methods (16). In a control experiment the sample was pumped at 775 nm where the absorption spectrum of bR vanishes.…”
Section: Resultsmentioning
confidence: 99%
“…This technical limit excluded the direct observation of the ultrafast charge translocation events taking place in the retinal chromophore and its proximity during the excited state and right after its relaxation. However, in both early (10) and recent literature (11)(12)(13)(14)(15)(16), more and more evidence indicates that these initial polarization processes possess a functional role in triggering the isomerization of retinal and initiating the proton pump.…”
mentioning
confidence: 99%
“…The time evolution of the retinal polarization was followed indirectly by observing the transient absorption of the neighboring tryptophan residues (14,15), resulting in an unresolved component assigned to the Franck-Condon polarization and a second phase developed in Ϸ200 fs and attributed to the charge translocation along the conjugate chain. A more direct observation of the Franck-Condon polarization was carried out by the detection of the corresponding resonant optical rectification signal from bR in coherent infrared emission experiments (16,19). The sensitive heterodyne detection technique applied in those studies covered the extremely high 20-to 50-THz range, but still did not provide any information on the detailed kinetics of electron polarization in the retinal chromophore or on the primary events of the proton translocation.…”
The kinetics of electrogenic events associated with the different steps of the light-induced proton pump of bacteriorhodopsin is well studied in a wide range of time scales by direct electric methods. However, the investigation of the fundamental primary charge translocation phenomena taking place in the functional energy conversion process of this protein, and in other biomolecular assemblies using light energy, has remained experimentally unfeasible because of the lack of proper detection technique operating in the 0.1-to 20-THz region. Here, we show that extending the concept of the familiar Hertzian dipole emission into the extreme spatial and temporal range of intramolecular polarization processes provides an alternative way to study ultrafast electrogenic events on naturally ordered biological systems. Applying a relatively simple experimental arrangement based on this idea, we were able to observe light-induced coherent terahertz radiation from bacteriorhodopsin with femtosecond time resolution. The detected terahertz signal was analyzed by numerical simulation in the framework of different models for the elementary polarization processes. It was found that the principal component of the terahertz emission can be well described by excited-state intramolecular electron transfer within the retinal chromophore. An additional slower process is attributed to the earliest phase of the proton pump, probably occurring by the redistribution of a H bond near the retinal. The correlated electron and proton translocation supports the concept, assigning a functional role to the light-induced sudden polarization in retinal proteins. coherent terahertz emission ͉ excited-state kinetics ͉ nonlinear spectroscopy ͉ sudden polarization ͉ ultrafast charge separation
“…2 Inset. This range, the upper limit of which was determined by the time resolution of our experimental setup, fills an important part of the gap between the frequency regions accessible by electronic measuring techniques (5-7) and coherent infrared emission methods (16). In a control experiment the sample was pumped at 775 nm where the absorption spectrum of bR vanishes.…”
Section: Resultsmentioning
confidence: 99%
“…This technical limit excluded the direct observation of the ultrafast charge translocation events taking place in the retinal chromophore and its proximity during the excited state and right after its relaxation. However, in both early (10) and recent literature (11)(12)(13)(14)(15)(16), more and more evidence indicates that these initial polarization processes possess a functional role in triggering the isomerization of retinal and initiating the proton pump.…”
mentioning
confidence: 99%
“…The time evolution of the retinal polarization was followed indirectly by observing the transient absorption of the neighboring tryptophan residues (14,15), resulting in an unresolved component assigned to the Franck-Condon polarization and a second phase developed in Ϸ200 fs and attributed to the charge translocation along the conjugate chain. A more direct observation of the Franck-Condon polarization was carried out by the detection of the corresponding resonant optical rectification signal from bR in coherent infrared emission experiments (16,19). The sensitive heterodyne detection technique applied in those studies covered the extremely high 20-to 50-THz range, but still did not provide any information on the detailed kinetics of electron polarization in the retinal chromophore or on the primary events of the proton translocation.…”
The kinetics of electrogenic events associated with the different steps of the light-induced proton pump of bacteriorhodopsin is well studied in a wide range of time scales by direct electric methods. However, the investigation of the fundamental primary charge translocation phenomena taking place in the functional energy conversion process of this protein, and in other biomolecular assemblies using light energy, has remained experimentally unfeasible because of the lack of proper detection technique operating in the 0.1-to 20-THz region. Here, we show that extending the concept of the familiar Hertzian dipole emission into the extreme spatial and temporal range of intramolecular polarization processes provides an alternative way to study ultrafast electrogenic events on naturally ordered biological systems. Applying a relatively simple experimental arrangement based on this idea, we were able to observe light-induced coherent terahertz radiation from bacteriorhodopsin with femtosecond time resolution. The detected terahertz signal was analyzed by numerical simulation in the framework of different models for the elementary polarization processes. It was found that the principal component of the terahertz emission can be well described by excited-state intramolecular electron transfer within the retinal chromophore. An additional slower process is attributed to the earliest phase of the proton pump, probably occurring by the redistribution of a H bond near the retinal. The correlated electron and proton translocation supports the concept, assigning a functional role to the light-induced sudden polarization in retinal proteins. coherent terahertz emission ͉ excited-state kinetics ͉ nonlinear spectroscopy ͉ sudden polarization ͉ ultrafast charge separation
“…18 DFG has further found applications in semiconductors. 10,11 In this paper we focus on an ultrafast DFG technique known as coherence emission spectroscopy/optical rectification, 19,20 whereby two femtosecond visible pulses resonant with an electronic transition create vibrational coherences in both the ground and the excited electronic states. The generated heterodyne detected infrared field (both amplitude and phase) reveals vibrational modes strongly coupled to the photoexcitation.…”
Section: Introductionmentioning
confidence: 99%
“…The generated heterodyne detected infrared field (both amplitude and phase) reveals vibrational modes strongly coupled to the photoexcitation. This technique has been applied using 11 fs pulses to study protein vibrational motions coupled to an electronically excited cofactor in photoactivable single crystals (The photodissociation of the heme cofactor in ordered crystals of myoglobin 19 and the retinal trans f cis photoisomerization in oriented films for bacteriorhodopsin 20 ). These experiments have opened up new possibilities for probing protein structure and for following concerted motions induced by an external femtosecond trigger.…”
The difference frequency generation (DFG) signal from a two electronic level system with vibrational modes coupled to a Brownian oscillator bath is computed. Interference effects between two Liouville space pathways result in pure-dephasing-induced, excited-state resonances provided the two excitation pulses overlap and time ordering is not enforced. Numerical simulations of two-dimensional DFG signals illustrate how the ground and excited electronic state resonances may be distinguished.
The photocycle of channelrhodopsin-2 is investigated in a comprehensive study by ultrafast absorption and fluorescence spectroscopy as well as flash photolysis in the visible spectral range. The ultrafast techniques reveal an excited-state decay mechanism analogous to that of the archaeal bacteriorhodopsin and sensory rhodopsin II from Natronomonas pharaonis. After a fast vibrational relaxation of the excited-state population with 150 fs its decay with mainly 400 fs is observed. Hereby, both the initial all-trans retinal ground state and the 13-cis-retinal K photoproduct are populated. The reaction proceeds with a 2.7 ps component assigned to cooling processes. Small spectral shifts are observed on a 200 ps timescale. They are attributed to conformational rearrangements in the retinal binding pocket. The subsequent dynamics progresses with the formation of an M-like intermediate (7 and 120 μs), which decays into red-shifted states within 3 ms. Ground-state recovery including channel closing and reisomerization of the retinal chromophore occurs in a triexponential manner (6 ms, 33 ms, 3.4 s). To learn more about the energy barriers between the different photocycle intermediates, temperature-dependent flash photolysis measurements are performed between 10 and 30°C. The first five time constants decrease with increasing temperature. The calculated thermodynamic parameters indicate that the closing mechanism is controlled by large negative entropy changes. The last time constant is temperature independent, which demonstrates that the photocycle is most likely completed by a series of individual steps recovering the initial structure.
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